Single Nucleotide Polymorphisms linked to the SlMYB12 Gene that Controls Fruit Peel Color in Domesticated Tomatoes (Solanum lycopersicum L.) |
Kim, Bichsaem
(Department of Horticultural Bioscience, Pusan National University)
Kim, Nahui (Department of Horticultural Bioscience, Pusan National University) Kang, Jumsoon (Department of Horticultural Bioscience, Pusan National University) Choi, Youngwhan (Department of Horticultural Bioscience, Pusan National University) Sim, Sung-Chur (Department of Bioresources Engineering, Sejong University) Min, Sung Ran (Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB)) Park, Younghoon (Department of Horticultural Bioscience, Pusan National University) |
1 | FAO(Food and Agriculture Organization of the United Nations). 2012. Production/Crop. http://faostat3.fao.org/browser/Q/QC/E |
2 | Grotewold, E. 2006. The genetics and biochemistry of floral pigments. Annual Rev. Plant Biol. 57:761-780. DOI |
3 | Hamilton, J.P. and C.R. Buell. 2012. Advances in plant genome sequencing. Plant J. 70:177-190. DOI |
4 | Harborne, J.B. and C.A. Williams. 2000. Advances in flavonoid research since 1992. Phytochemistry 55:481-504. DOI |
5 | Hunt, G.M. and E.A. Baker. 1980. Phenolic constituents of tomato fruit cuticles. Phytochemistry 19:1415-1419. DOI |
6 | Kimura, S. and N. Sinha. 2008. Tomato (Solanum lycopersicum):a model fruit-bearing crop. Cold Spring Harb. Protoc. 11:1-9. |
7 | Lindstrom, E.W. 1925. Inheritance in Tomatoes. Genet. 10:305-317. |
8 | Mehrtens, F., H. Kranz, P. Bednarek, and B. Weisshaar. 2005. The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis. Plant Physiol. 138:1083-1096. DOI |
9 | Nei, M. and W.H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S. 76:5269-5273. DOI |
10 | Park, Y.H., J.H. Hwang, K.H. Kim., J.S. Kang, B.S. Kim, S. Xu, and Y.K. Ahn. 2013. Development of the gene-based SCARs for the Ph-3 locus, which confers late blight resistance in tomato. Sci. Hortic. 164:9-16. DOI |
11 | Rick, C.M. and L. Butler. 1956. Cytogenetics of the tomato. Adv. Genet. 8:267-382. DOI |
12 | Adato, A., T. Mandel , S. Mintz-Oron, I. Venger, D. Levy, M. Yativ, E. Dominguez, Z. Wang, R.C. De Vos, R. Jetter, L. Schreiber, A. Heredia, I. Rogachev, and A. Aharoni. 2009. Fruit-surface flavonoid accumulation in tomato is controlled by a SlMYB12-regulated transcriptional network. PLoS Genet. 5:e1000777. DOI |
13 | Ballester, A.R., J. Molthoff, R. De Vos, B. Hekkert, D. Orzaez, J.P. Fernandez-Moreno, P. Tripodi, S. Grandillo, C. Martin, J. Heldens, M. Ykema, A. Granell, and A. Bovy. 2010. Biochemical and molecular analysis of pink tomatoes: deregulated expression of the gene encoding transcription factor SlMYB12 leads to pink tomato fruit color. Plant Physiol. 152:71-84. DOI |
14 | Caicedo, A. and I. Peralta. 2013. Basic information about tomatoes and the tomato group, p. 1-27. In: B.E. Liedl, J.A. Labate, J.R. Stommel, A. Slade, and C. Kole (eds.) Genetis, Genomics, and Breeding of Tomato. CRC Press, Boca Raton, FL. |
15 | Choudhury, N.K. and R. Behera. 2001. Photoinhibition of photosynthesis:role of carotenoids in photoprotection of chloroplast constituents. Photosynthetica 39:481-488. DOI |
16 | Dao, T.T., H.J. Linthorst, and R. Verpoorte. 2011. Chalcone synthase and its functions in plant resistance. Phytochem. Rev. 10:397-412. DOI |
17 | Treutter, D. 2005. Significance of flavonoids in plant resistance and enhancement of their biosynthesis. Plant Biol. 7:581-591. DOI ScienceOn |
18 | Rohlf, F. 2002. NTSYSpc: Numerical taxonomy system, ver. 2.1. Setauket, NY: Exeter Publishing Ltd. |
19 | Sim, S.C., G. Durstewitz, J. Plieske, R. Wieseke, M.W. Ganal, A. Van Deynze, J.P. Hamilton, C.R. Buell, M. Causse, and S. Wijeratne. 2012. Development of a large SNP genotyping array and generation of high-density genetic maps in tomato. PLoS One 7:e40563. DOI |
20 | Thomson, M.J., K. Zhao, M. Wright, K.L. McNally, J. Rey, C. Tung, A. Reynolds, B. Scheffler, G. Eizenga, and A. McClung. 2012. High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform. Mol. Breed. 29:875-886. DOI |