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http://dx.doi.org/10.7235/hort.2014.13042

Genetic Diversity and Spatial Genetic Structure of Berchemia racemosa var. magna in Anmyeon Island  

Song, Jeong-Ho (Division of Special-purpose Trees, Korea Forest Research Institute)
Lim, Hyo-In (Division of Forest Genetic Resources, Korea Forest Research Institute)
Jang, Kyeong-Hwan (Division of Forest Genetic Resources, Korea Forest Research Institute)
Hong, Kyung-Nak (Division of Forest Genetic Resources, Korea Forest Research Institute)
Han, Jingyu (Division of Forest Genetic Resources, Korea Forest Research Institute)
Publication Information
Horticultural Science & Technology / v.32, no.1, 2014 , pp. 84-90 More about this Journal
Abstract
Berchemia racemosa var. magna is only found in Anmyeon Island of South Korea. Genetic diversity and the spatial genetic structure of B. racemosa var. magna in Anmyeon Island were studied by I-SSR marker system. Fifty I-SSR amplicons were produced from 8 selected primers. We used 13 polymorphic markers to analyze the genetic structure. Distribution of 39 individuals in the study plot($90m{\times}70m$) showed aggregate pattern (aggregation index = 0.706). Total 21 genets were observed from 39 individuals through I-SSR genotyping. Proportion of distinguishable genotype (G/N), genotype diversity (D) and genotype evenness (E) were 53.8%, 0.966 and 0.946, respectively. In spite of the small number and the narrow distribution, Shannon's diversity index (I = 0.598) was relatively high as compared with those of the other plant species. For ex situ genetic conservation of B. racemosa var. magna, the sampling strategy based on spatial autocorrelation using Tanimoto distance is efficient at choosing the conserved individuals with a 6 meter interval between individual trees.
Keywords
aggregation index; I-SSR marker; sampling strategy; Shannon's diversity index; spatial autocorrelation;
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