ITS2 DNA Sequence Analysis for Eight Species of Delphacid Planthoppers and a Loop-mediated Isothermal Amplification Method for the Brown Planthopper-specific Detection |
Seo, Bo Yoon
(Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration)
Park, Chang Gyu (Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration) Koh, Young-Ho (Ilsong Institute of Life Science, Hallym University) Jung, Jin Kyo (Crop Cultivation and Environment Research Division, National Institute of Crop Science, Rural Development Administration) Cho, Jumrae (Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration) Kang, Chanyeong (Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration) |
1 | Kim, H.Y., Park, C.G., Han, M.W., Uhm, K.B., Woo, K.S., 2002. Development of a hypertext-based polychotomous key for the identification of planthoppers caught by light trap in paddy fields. Korean J. Appl. Entomol. 41, 75-83. |
2 | Mori, Y., Kanda, H., Notomi, T., 2013. Loop-mediated isothermal amplification (LAMP): recent progress in research and development. J. Infect. Chemother. 19, 404-411. DOI |
3 | Nagamine, K., Hase, T., Notomi, T., 2002. Accelerated reaction by loop-mediated isothermal amplification using loop primers. Mol. Cell. Probes 16, 223-229. DOI |
4 | Njiru, Z.K., 2012. Loop-mediated isothermal amplification technology: towards point of care diagnostics. PLoS Negl. Trop. Dis. 6(6): e1572, doi:10.1371/journal.pntd.0001572. DOI |
5 | Notomi, T., Okayama, H., Masubuchi, H., Yonekawa, T., Watanabe, K., Amino, N., Hase, T., 2000. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res., 28, e63. DOI |
6 | Seo, B.Y., Jung, J.K., Park, K.J., Cho, J.R., Lee, G.S., Jung, C.R., 2014. Molecular identification of Trichogramma (Hymenoptera: Trichogrammatidae) egg parasitoids of the Asian corn borer Ostrinia furnacalis, based on ITS2 rDNA sequence analysis. Korean J. Appl. Entomol. 53, 247-260. DOI |
7 | Seo, B.Y., Kwon, Y.-H., Jung, J.K., Kim, G.-H., 2009. Electrical penetration graphic waveforms in relation to the actual positions of the stylet tips of Nilaparvata lugens in rice tissue. J. Asia-Pac. Entomol. 12, 89-95. DOI |
8 | Sogawa, K., 1982. The rice brown planthopper: feeding physiology and host plant interactions. Annu. Rev. Entomol. 27, 49-73. DOI |
9 | Hillis, D.M., Dixon, M.T., 1991. Ribosomal DNA: molecular evolution and phylogenetic inference. Q. Rev. Biol. 66, 411-426. DOI |
10 | Tamura, K., Stecher, G., Peterson, D., Filipski, A., Kumar, S., 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 30, 2725-2729. DOI |
11 | Uhm, K.B., Park, J.S., Lee, Y.I., Choi, K.M., Lee, M.H., Lee, J.O., 1988. Relationship between some weather conditions and immigration of the brown planthopper, Nilaparvata lugens Stal. Korean J. Appl. Entomol. 27, 200-210. |
12 | White, T.J., Bruns, T., Lee, S., Taylor, J., 1990. Amplification and direct sequencing of fungal ribosomal genes for phylogenetics, in: Innis, M.A., Gelfand, D.H., Sninsky, J.J., White, T.J. (Eds.), PCR protocols, a guide to methods and applications. Academic Press, San Diego, California, pp. 315-322. |
13 | Dickey, A.M., Osborne, L.S., Shatters, Jr., R.G., Mckenzie, C.L., 2013. Identification of the Meam1 cryptic species of Bemisia tabaci (Hemiptera: Aleyrodidae) by loop-mediated isothermal amplification. Fla. Entomol. 96, 756-764. DOI |
14 | Wilson, M.R., Claridge, M.F., 1991. Handbook for the identification of leafhoppers and planthoppers of rice. CAB International, Wallingford, UK. |
15 | Zhang, X., Lowe, S.B., Gooding, J.J., 2014. Brief review of monitoring methods for loop-mediated isothermal amplification (LAMP). Biosens. Bioelectron. 61, 491-499. DOI |
16 | Bonizzoni, M., Afrane, Y., Yan, G., 2009. Loop-mediated isothermal amplification (LAMP) for rapid identification of Anopheles gambiae and Anopheles arabiensis mosquitoes. Am. J. Trop. Med. Hyg. 81, 1030-1034. DOI |
17 | Cabauatan, P.Q., Cabunagan, R.C., Choi, I.R., 2009. Rice viruses transmitted by the brown planthopper Nilaparvata lugens Stal, in: Heong, K.L., Hardy, B. (Eds.), Planthoppers: new threats to the sustainability of intensive rice production systems in Asia. International Rice Research Institute, Los Banos, pp. 357-368. |