1 |
Altschul, S.F., Madden, T.L., Sch ffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res. 25, 3389-3402
DOI
ScienceOn
|
2 |
Boyce, R., Chilana, P., and Rose, T.M. (2009). iCODEHOP: a new interactive program for designing COnsensus DEgenerate Hybrid Oligonucleotide Primers from multiply aligned protein sequences. Nucl. Acids Res . 37, W222-228
DOI
ScienceOn
|
3 |
Pearson, W.R. (1990), Rapid and sensitive sequence comparison with FASTP and FASTA, Methods Enzymol . 183, 63-98
DOI
PUBMED
|
4 |
van Baren, M.J., and Heutink, P. (2004). The PCR suite. Bioinformatics . 20, 591-593
DOI
ScienceOn
|
5 |
Boutros, R., Stokes, N., Bekaert, M., and Teeling, E.C. (2009). UniPrime2: a web service providing easier Universal Primer design. Nucl. Acids Res . 37, W209-213
DOI
ScienceOn
|
6 |
Thompson, J.D., Gibson, T.J., and Higgins, D.G. (2002). Multiple sequence alignment using ClustalW and ClustalX. Curr. Protoc. Bioinform. Chapter 2, Unit 2.3
|
7 |
You, F.M., Huo, N., Gu, Y.Q., Luo, M.C., Ma, Y., Hane, D.,Lazo, G.R., Dvorak, J., and Anderson, O.D. (2008). BatchPrimer3: a high throughput web application for PCR and sequencing primer design. BMC Bioinform . 9, 253
DOI
PUBMED
ScienceOn
|
8 |
Kent, W.J. (2002). BLAT--the BLAST-like alignment tool. Genome Res . 12, 656-664
DOI
PUBMED
|
9 |
Moro, C.V., Crouzet, O., Rasconi, S., Thouvenot, A., Coffe, G., Batisson, I., and Bohatier, J. (2009). New design strategy for development of specific primer sets for PCR-based detection of Chlorophyceae and Bacillariophyceae in environmental samples. Appl. Environ. Microbiol . 75, 5729-5733
DOI
ScienceOn
|
10 |
Andreson, R., Reppo, E., Kaplinski, L., and Remm, M. (2006). GENOMEMASKER package for designing unique genomic PCR primers. BMC Bioinform. 7, 172
DOI
PUBMED
|