Comparison of Normalization Methods for Defining Copy Number Variation Using Whole-genome SNP Genotyping Data |
Kim, Ji-Hong
(Integrated Research Center for Genome Polymorphism)
Yim, Seon-Hee (Department of Microbiology, The Catholic University of Korea, College of Medicine) Jeong, Yong-Bok (Integrated Research Center for Genome Polymorphism) Jung, Seong-Hyun (Integrated Research Center for Genome Polymorphism) Xu, Hai-Dong (Integrated Research Center for Genome Polymorphism) Shin, Seung-Hun (Integrated Research Center for Genome Polymorphism) Chung, Yeun-Jun (Integrated Research Center for Genome Polymorphism) |
1 | Iafrate, A.J., Feuk, L., Rivera, M.N., Listewnik, M.L., Donahoe, P.K., Qi, Y., Scherer, S.W., and Lee, C. (2004). Detection of large-scale variation in the human genome. Nat. Genet. 36, 949-951 DOI ScienceOn |
2 | Perry, G.H., Ben-Dor, A., Tsalenko, A., et al. (2008). The fine-scale and complex architecture of human copy-number variation. Am. J. Hum. Genet. 82, 685-695 DOI ScienceOn |
3 | Price, T.S., Regan, R., Mott, R., et al., (2005) SW-ARRAY: a dynamic programming solution for the identification of copy-number changes in genomic DNA using array comparative genome hybridization data. Nucleic Acids Res. 33, 3455-3464 DOI ScienceOn |
4 | McCarroll, S.A., and Altshuler, D.M. (2007). Copy-number variation and association studies of human disease. Nat. Genet. 39, S37-S42 DOI ScienceOn |
5 | Sebat, J., Lakshmi, B., Troge, J., et al. (2004). Large-scale copy number polymorphism in the human genome. Science 305, 525-528 DOI ScienceOn |
6 | Kim, T.M., Yim, S.H., and Chung, Y.J. (2008). Copy number variations in the human genome: potential source for individual diversity and disease association studies. Genomics & Informatics 6, 1-7 과학기술학회마을 DOI |
7 | Estivill, X., and Armengol, L. (2007). Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies. PLoS Genet. 10, 1787-1799 |
8 | de Smith, A.J., Tsalenko, A., Sampas, N., et al. (2007). Array CGH analysis of copy number variation identifies 1284 new genes variant in healthy white males: implications for association studies of complex diseases. Hum. Mol. Genet. 16, 2783-2794 DOI ScienceOn |
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