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http://dx.doi.org/10.9717/kmms.2019.22.10.1168

Alzheimer's Disease Classification with Automated MRI Biomarker Detection Using Faster R-CNN for Alzheimer's Disease Diagnosis  

Son, Joo Hyung (Department of Computer and Electronic Systems Engineering, Hankuk University of Foreign Studies)
Kim, Kyeong Tae (Department of Computer and Electronic Systems Engineering, Hankuk University of Foreign Studies)
Choi, Jae Young (Department of Computer and Electronic Systems Engineering, Hankuk University of Foreign Studies)
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Abstract
In order to diagnose and prevent Alzheimer's Disease (AD), it is becoming increasingly important to develop a CAD(Computer-aided Diagnosis) system for AD diagnosis, which provides effective treatment for patients by analyzing 3D MRI images. It is essential to apply powerful deep learning algorithms in order to automatically classify stages of Alzheimer's Disease and to develop a Alzheimer's Disease support diagnosis system that has the function of detecting hippocampus and CSF(Cerebrospinal fluid) which are important biomarkers in diagnosis of Alzheimer's Disease. In this paper, for AD diagnosis, we classify a given MRI data into three categories of AD, mild cognitive impairment, and normal control according by applying 3D brain MRI image to the Faster R-CNN model and detect hippocampus and CSF in MRI image. To do this, we use the 2D MRI slice images extracted from the 3D MRI data of the Faster R-CNN, and perform the widely used majority voting algorithm on the resulting bounding box labels for classification. To verify the proposed method, we used the public ADNI data set, which is the standard brain MRI database. Experimental results show that the proposed method achieves impressive classification performance compared with other state-of-the-art methods.
Keywords
Computer-Aided Diagnosis; Alzheimer's Disease; Deep Convolution Neural Network; Faster R-CNN; Biomarker;
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1 R. Brookmeyer, E. Johnson, K. Ziegler-Graham, and H.M. Arrighi, "Forecasting the Global Burden of Alzheimer's Disease," Alzheimer's and Dementia, Vol. 3, No. 3, pp. 186-191, 2007.   DOI
2 C. Grady, S. Sarraf, C. Saverino, and K. Campbell, "Age Differences in the Functional Interactions among the Default, Frontoparietal Control, and Dorsal Attention Networks," Neurobiology of Aging, Vol. 41, pp. 159-172, 2016.   DOI
3 S. Ren, K. He, R. Girshick, and J. Sun, "Faster R-cnn: Towards Real-time Object Detection with Region Proposal Networks," Advances in Neural Information Processing Systems, pp. 91-99, 2015.
4 A. Payan and G. Montana, "Predicting Alzheimer's Disease: a Neuroimaging Study with 3D Convolutional Neural Networks," arXiv Preprint arXiv:1502.02506, 2015.
5 K. Aderghal, J. Benois-Pineau, and K. Afdel, "Classification of sMRI for Alzheimer's Disease Diagnosis with CNN: Single Siamese Networks with 2D+? Approach and Fusion on ADNI," Proceeding of the 2017 ACM on International Conference on Multimedia Retrieval, pp. 494-498, 2017.
6 C.R. Jack, M.A. Bernstein, N.C. Fox, P. Thompson, G. Alexander, D. Harvey, et al., "The Alzheimer's Disease Neuroimaging Initiative(ADNI): MRI Methods," Journal of Magnetic Resonance Imaging: An Official Journal of the International Society for Magnetic Resonance in Medicine, Vol. 27, No. 4, pp. 685-691, 2008.   DOI
7 J. Long, E. Shelhamer, and T. Darrell, "Fully Convolutional Networks for Semantic Segmentation," Proceeding of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 3431-3440, 2015.
8 K. Simonyan and A. Zisserman, "Very Deep Convolutional Networks for Large-scale Image Recognition," arXiv Preprint arXiv:1409.1556, 2014.
9 R. Girshick, J. Donahue, T. Darrell, and J. Malik, "Rich Feature Hierarchies for Accurate Object Detection and Semantic Segmentation," Proceeding of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 580-58, 2014.
10 J. Samper-Gonzalez, N. Burgos, S. Bottani, S. Fontanella, P. Lu, A. Marcoux, et al., "Reproducible Evaluation of Classification Methods in Alzheimer's Disease: Framework and Application to MRI and PET Data," NeuroImage, Vol. 183, pp. 504-521, 2018.   DOI
11 A. Khvostikov, K. Aderghal, A. Krylov, G. Catheline, and J. Benois-Pineau, "3D Inception-based CNN with sMRI and MD-DTI Data Fusion for Alzheimer's Disease Diagnostics," arXiv Preprint arXiv:1809.03972, 2018.
12 X. Yang, M.Z. Tan, and A. Qiu, "CSF and Brain Structural Imaging Markers of the Alzheimer's Pathological Cascade," PloS one, Vol. 7, No. 12, pp. e47406-e47406, 2012.   DOI
13 O.B. Ahmed, J. Benois-Pineau, M. Allard, G. Catheline, and C.B. Amar, “Recognition of Alzheimer's Disease and Mild Cognitive Impairment with Multimodal Image-derived Biomarkers and Multiple Kernel Learning,” Neurocomputing, Vol. 100, No. 220, pp. 98-110, 2017.
14 D. Cheng and L. Manhua, "Combining Convolutional and Recurrent Neural Networks for Alzheimer's Disease Diagnosis Using PET Images," Proceeding of 2017 IEEE International Conference on Imaging Systems and Techniques, pp. 18-20, 2017.
15 R. Girshick, "Fast R-CNN," Proceeding of the IEEE International Conference on Computer Vision, pp. 1440-1448, 2015.
16 J.R. Uijlings, V.D. Sande, K.E. Gevers, and A.W. Smeulders, "Selective Search for Object Recognition," International Journal of Computer Vision, Vol. 104, No. 2, pp. 154-171, 2013.   DOI
17 D. Ruta and B. Gabrys, “Classifier Selection for Majority Voting,” Information Fusion, Vol. 6, No. 1, pp. 63-81, 2005.   DOI
18 B. Fischl, D.H. Salat, E. Busa, M. Albert, M. Dieterich, C. Haselgrove, et al., "Whole Brain Segmentation: Automated Labeling of Neuroanatomical Structures in the Human Brain," Neuron, Vol. 33, No. 3 pp. 341-355, 2002.   DOI
19 M.W. Weiner, D.P. Veitch, P.S. Aisen, L.A. Beckett, N.J. Caims, J. Cedarbaum, et al., "2014 Update of the Alzheimer's Disease Neuroimaging Initiative: A Review of Papers Published since Its Inception," Alzheimers Dement, Vol. 11, No. 6, pp. e1-e120, 2015.   DOI
20 A.S. Lundervold and A. Lundervold, “An Overview of Deep Learning in Medical Imaging Focusing on MRI,” Zeitschrift fur Medizinische Physik, Vol. 29, No. 2, pp. 102-127, 2019.   DOI
21 N. Madusanka, Y.Y. Choi, K.Y. Choi, K.H. Lee, and H.K. Choi, "Hippocampus Segmentation and Classification in Alzheimer's Disease and Mild Cognitive Impairment Applied on MR Images," Journal of Korea Multimedia Society, Vol. 20, No. 2, pp. 205-215. 2017.   DOI