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http://dx.doi.org/10.9717/kmms.2016.19.8.1236

Contrast-enhanced Bias-corrected Distance-regularized Level Set Method Applied to Hippocampus Segmentation  

Selma, Tisa (Department of Computer Engineering, Inje University)
Madusanka, Nuwan (Department of Computer Engineering, Inje University)
Kim, Tae-Hyung (Department of BioMedical Engineering, Inje University)
Kim, Young-Hoon (Department of Psychiatry, Inje University Hospital)
Mun, Chi-Woong (Department of BioMedical Engineering, Inje University)
Choi, Heung-Kook (Department of Computer Engineering, Inje University)
Publication Information
Abstract
Recently, the level set has become a popular method in many research fields. The main reason is that it can be modified into many variants. One such case is our proposed method. We describe a contrast-enhancement method to segment the hippocampal region from the background. However, the hippocampus region has quite similar intensities to the neighboring pixel intensities. In addition, to handle the inhomogeneous intensities of the hippocampus, we used a bias correction before hippocampal segmentation. Thus, we developed a contrast-enhanced bias-corrected distance-regularized level set (CBDLS) to segment the hippocampus in magnetic resonance imaging (MRI). It shows better performance than the distance-regularized level set evolution (DLS) and bias-corrected distance-regularized level set (BDLS) methods in 33 MRI images of one normal patient. Segmentation after contrast enhancement and bias correction can be done more accurately than segmentation while not using a bias-correction method and without contrast enhancement.
Keywords
Contrast-enhancement Method; Hippocampus Segmentation; Distance-regularized Level Set; Magnetic Resonance Imaging (MRI);
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1 P. Macklin and J. Lowengrub, "An Improved Geometry-aware Curvature Discretization for Level Set Methods: Application to Tumor Growth," Journal of Computational Physics, Vol. 215, No. 2, pp. 392-401, 2006.   DOI
2 J.A. Sethian, Level Set Methods and Fast Marching Methods, Cambridge University Press, UK, 1999.
3 S.J. Osher and R. Fedkiw, Level Set Methods and Dynamic Implicit Surfaces, Springer-Verlag, New York, 2003.
4 M. Sussman, P. Smereka, and S. Osher, "A Level Set Approach for Computing Solutions to Incompressible Two-phase Flow," Journal of Computational Physics, Vol. 114, pp. 146-159, 1994.   DOI
5 D. Peng, B. Merriman, S. Osher, H. Zhao, and M. Kang, "A PDE Based Fast Local Level Set Method," Journal of Computational Physics, Vol. 155, No. 2, pp. 410-438, 1999.   DOI
6 J. Gomes and O. Faugeras, "Reconciling Distance Functions and Level Sets," Journal of Visual Communication and Image Represent, Vol. 11, No. 2, pp. 209-223, 2000.   DOI
7 M. Weber, A. Blake, and R. Cipolla, "Sparse Finite Elements for Geodesic Contours with Level-sets," Proceeding of European Conference on Computer Vision, pp. 391-404, 2004.
8 S. Kichenassamy, A. Kumar, P. Olver, A. Tannenbaum, and A. Yezzi, "Gradient Flows and Geometric Active Contour Models," Proceeding of 5th International Conference on Computer Vision, pp. 810-815, 1995.
9 V. Caselles, R. Kimmel, and G. Sapiro, "Geodesic Active Contours," International Journal Computer Vision, Vol. 22, No. 1, pp. 61-79, 1997.   DOI
10 R. Kimmel, A. Amir, and A. Bruckstein, "Finding Shortest Paths on Surfaces Using Level Set Propagation," IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 17, No. 6, pp. 635-640, 1995.   DOI
11 M.A. Balafar, "Review of Intensity Inhomogeneity Correction Methods for Brain Images," International Journal on Technical and Physical Problems of Engineering, Vol. 4, No. 30, pp. 60-66, 2012.
12 C. Li, R. Huang, Z. Ding, J.C. Gatenby, D.N. Metaxas, and J.C. Core, "A Level Set Method for Image Segmentation in the Presence of Intensity Inhomogeneities with Application to MRI," IEEE Transactions on Image Processing, Vol. 20, No. 7, pp. 2007-2016, 2011.   DOI
13 H.I. Ashiba, H.M. Mansour, M.F. El-kordy, and H.M. Ahmed, "A New Approach for Contrast Enhancement of Infrared Images Based on Contrast Limited Adaptive Histogram Equalization," Applied Mathematics & Information Sciences Letters, Vol. 3, No. 3, pp. 123-125, 2015.
14 W. Weifeng, W. Wu, and Q. Hung, "An Improved Distance Regularized Level Set Evolution without Re-initialization," Proceeding of IEEE 5th International Conference on Advanced Computational Intelligence, pp. 631-636, 2012.
15 A.H. Lipkus, "A Proof of the Triangle Inequality for the Tanimoto Distance," Journal of Mathematical Chemistry, Vol. 26, No. 1, pp. 263-265, 1999.   DOI
16 M. Levandowsky and D. Winter, "Distance between Sets," Journal of Nature, Vol. 234, pp. 34-35, 1971.   DOI
17 The Free Encyclopedia, https://en.wikipedia.org/wiki/Hippocampus (Feb. 15, 2016)
18 S. Osher and J.A. Sethian, "Fronts Propagating with Curvature Dependent Speed: Algorithms Based on Hamilton-Jacobi Formulations," Journal of Computational Physics, Vol. 79, No. 1, pp. 12-49, 1998.   DOI
19 V. Caselles, F. Catte, T. Coll, and F. Dibos, "A Geometric Model for Active Contours in Image Processing," Journal of Numerische Mathematik, Vol. 66, No. 1, pp. 1-31, 1993.   DOI
20 R. Malladi, J.A. Sethian, and B.C. Vemuri, "Shape Modeling with Front Propagation: A Level Set Approach," Journal of Pattern Analysis & Machine Intelligence, Vol. 17, No. 2, pp. 158-175, 1995.   DOI
21 M. Kass, A. Witkin, and D. Terzopoulos, "Snakes: Active Contour Models," International Journal Computer Vision, Vol. 1, pp. 321-331, 1987.   DOI
22 L. Chunming, X. Chenyang, G. Changfeng, and D.F. Martin, "Distance Regularized Level Set Evolution and Its Application to Image Segmentation," IEEE Transactions on Image Processing, Vol. 19, No. 12, pp. 3243-3254, 2010.   DOI
23 B. Vongphachanh and H.K. Choi, "Comparison of Level Set-based Active Contour Models on Subcortical Image Segmentation," Journal of Korea Multimedia Society, Vol. 18, No. 7, pp. 827-833, 2015.   DOI
24 Y.S. Lee and H.K. Choi, "A Hippocampus Segmentation in Brain MR Images Using Level-set Method," Journal of Korea Multimedia Society, Vol. 15. No. 9, pp. 1075-1085, 2012.   DOI
25 C. Li, C.Y. Kao, J.C. Gore, and Z. Ding, "Minimization of Region-scalable Fitting Energy for Image Segmentation," IEEE Transaction on Image Processing, Vol. 17, No. 10, pp. 1940-1949, 2008.   DOI
26 C. Samson, L. Blanc-Feraud, G. Aubert, and J. Zerubia, "A Variational Model for Image Classification and Restoration," IEEE Transaction on Pattern Analysis and Machine Intelligence, Vol. 22, No. 5, pp. 460-472, 2000.   DOI
27 N. Paragios and R. Deriche, "Geodesic Active Regions and Level Set Methods for Motion Estimation and Tracking," Computer Vision and Image Understanding, Vol. 97, No. 3, pp. 259-282, 2005.   DOI
28 T. Chan and L. Vese, "Active Contours without Edges," IEEE Transaction on Image Processing, Vol. 10, No. 2, pp. 266-277, 2001.   DOI
29 D. Cremers, "A Multiphase Level Set Framework for Variational Motion Segmentation," Proceeding of the 4th International Conference on Scale Space Theories in Computer Vision, pp. 599-614, 2003.
30 H. Jin, S. Soatto, and A.J. Yezzi, "Multi-view Stereo Reconstruction of Dense Shape and Complex Appearance," International Journal of Computer Vision, Vol. 63, No. 3, pp. 175-189, 2005.   DOI
31 S.C. Zhu and A. Yuille, "Region Competition: Unifying Snakes, Region Growing, and Bayes/MDL for Multiband Image Segmentation," IEEE Transaction on Pattern Analysis and Machine Intelligence, Vol. 18, No. 9, pp. 884-900, 1996.   DOI
32 C. Xu and J.L. Prince, "Snakes, Shapes, and Gradient Vector Flow," IEEE Transactions on Image Processing, Vol. 7, No. 3, pp. 359-369, 1998.   DOI
33 C. Li, C. Xu, C. Gui, and M.D. Fox, "Level Set Evolution without Re-initialization: A New Variational Formulation," Proceeding of the IEEE Conference on Computer Vision and Pattern Recognition, Vol. 1, pp. 430-436, 2005.