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http://dx.doi.org/10.7845/kjm.2019.9070

Genome sequence of Bifidobacterium dentium strain ATCC 15424 originally isolated from pleural fluid of an empyema patient  

Moon, Ji-Hoi (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Kim, Suegene (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Yang, Seok Bin (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Jang, Eun-Young (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Shin, Seung-Yun (Department of Periodontology, School of Dentistry, Kyung Hee University)
Lee, Jin-Yong (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Lee, Jae-Hyung (Department of Maxillofacial Biomedical Engineering, School of Dentistry, Kyung Hee University)
Publication Information
Korean Journal of Microbiology / v.55, no.3, 2019 , pp. 280-282 More about this Journal
Abstract
We present here a draft genome sequence of Bifidobacterium dentium strain ATCC 15424, originally isolated from pleural fluid of an empyema patient. The genome is 2,625,535 bp in length and has a GC content of 58.5%. The genome includes 2,154 protein-coding genes, 4 rRNAs, and 55 tRNAs. Unlike other B. dentium strains isolated from human dental caries, ATCC 15424 carries 247 strain-specific genes, including prophage remnants and type III/IV secretion system proteins, N-acetylmuramoyl-L-alanine amidase, and PRTRC system protein E. The sequence information will contribute to understanding of the natural variation of B. dentium as well as the genome diversity within the bacterial species.
Keywords
Bifidobacterium dentium; genome; pleural fluid isolate;
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