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http://dx.doi.org/10.7845/kjm.2018.8075

Complete genome sequence of Variovorax sp. PMC12, a plant growth-promoting bacterium conferring multiple stress resistance in plants  

Lee, Shin Ae (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Kim, Hyeon Su (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Kim, Yiseul (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Sang, Mee Kyung (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Song, Jaekyeong (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Weon, Hang-Yeon (Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration (RDA))
Publication Information
Korean Journal of Microbiology / v.54, no.4, 2018 , pp. 471-473 More about this Journal
Abstract
Variovorax sp. PMC12 is a rhizobacterium isolated from tomato rhizosphere and enhanced the plant resistance to abiotic and biotic stresses. Here we present the complete genome sequence of strain PMC12. The genome is comprised of two circular chromosomes harboring 5,873,297 bp and 1,141,940 bp, respectively. A total of 6,436 protein-coding genes, 9 rRNAs, 64 tRNAs, 3 ncRNAs, and 80 pseudogenes were identified. We found genes involved in 1-aminocyclopropane-1-carboxylate (ACC) deaminase, antioxidant activity, phosphate solubilization, and biosynthesis of proline and siderophore. Those genes may be related to capability of improving plant resistance to various stresses including salinity, cold temperature, and phytopathogen.
Keywords
Variovorax; plant growth-promoting rhizobacteria; plant stress;
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