Characterization of anti-inflammatory effect of soybean septapeptide and its molecular mechanism
![]() |
Lewis, Kevin M.
(Department of Chemistry, Washington state University)
Sattler, Steven A. (School of Molecular Biosciences, Washington state University) Kang, ChulHee (Department of Chemistry, Washington state University) Wu, Hong Min (College of Pharmacy, Seoul National University) Kim, Sang Geon (College of Pharmacy, Seoul National University) Kim, Han Bok (Department of Biotechnology, Hoseo University) |
1 | Sanner MF. 1999. Phython: a programming language for software integration and development. J. Mol. Graph. Model 17, 57-61. |
2 |
Shibata W, Maeda S, Hikiba Y, Yanai A, Ohmae T, Sakamoto K, Nakagawa H, Ogura K, and Omata M. 2007. Cutting edge: The |
3 | Strana J and Burke JR. 2007. Ikappa B kinase inhibitors for treating auto immune and inflammatory disorders: potential and challenges. Pharmacol. Sci. 28, 142-148. |
4 | Stroud JC, Oltman A, Han A, Bates DL, and Chen L. 2009. Structural basis of HIV-1activation by NF-kappaB-a higher order complex of p50: RelA bound to the HIV-1 LTR. J. Mol. Biol. 393, 98-112. DOI |
5 |
Michael K. 1999. How |
6 |
Dolcet X, Llobet D, Pallares J, and Matias-Guiu X. 2005. NF- |
7 | Emsley P, Lohkamp B, Scott WG, and Cowtan K. 2010. Features and development of coot. Acta Crystallogr. D Biol. Crystallogr. 66, 486-501. DOI |
8 | Kelley LA, Mezulis S, Yates CM, Wass MN, and Sternberg MJ. 2015. The Phyre2 web portal for protein modeling, prediction and analysis. Nat. Protoc. 10, 845-858. DOI |
9 |
Ghosh S and Karin M. 2002. Missing pieces in the NF- |
10 |
Hwang JS, Yoo HJ, Song HJ, Kim KK, Chun YJ, Matsui T, and Kim HB. 2011. Inflammation-related signaling pathways implicating |
11 | Lee JJ, Lee DS, and Kim HB. 1999. Fermentation patterns of Chungkookjang and Kanjang by Bacillus licheniformis B1. Korean J. Microbiol. 35, 296-301. |
12 |
Lee WH, Wu HM, Lee CG, Sung DI, Song HJ, Matsui T, Kim HB, and Kim SG. 2014. Specific oligopeptides in fermented soybean extract inhibit NF- |
13 | Makarov SS. 2001. NF-kappaB in rheumatoid arthritis: a pivotal regulator of inflammation, hyperplasia, and tissue destruction. Arthritis Res. 3, 200-206. DOI |
14 |
Mathes E, O'Dea EL, Hoffmann A, and Ghosh G. 2008. NF- |
15 | Matsui T, Yoo HJ, Hwang JS, Lee DS, and Kim HB. 2004. Isolation of angiotensin 1-converting enzyme inhibitory peptide from Chungkookjang. Korean J. Microbiol. 40, 355-358. |
16 | Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral, GJ, Grosse-Kunstleve RW, et al. 2010. Phenix: a comprehensive Python-based system for macromolecular structure resolution. Acta Cryst. D66, 213-221. |
17 |
Xu G, Lo YC, Li Q, Napolitano G, Wu X, Jiang X, Dreano M, Karin M, and Wu H. 2011. Crystal structure of inhibitor of |
18 |
Cramer P, Larson CJ, Verdine GL, and Muller CW. 1997. Structure of the human NF- |
19 | Trott O and Olson AJ. 2010. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading. J. Comput. Chem. 31, 455-461. |
20 |
Whiteside ST and Israel A. 1997. |
21 | Yoo HJ, Hwang JS, and Kim HB. 2007. Mass analysis of isoflavones in Chungkookjang. Korean J. Microbiol. 43, 54-58. |
22 | Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, Goodsell DS, and Olson AJ. 2009. Auto dock4 and auto dock tools 4: Automated docking with selective receptor flexibility. J. Comput. Chem. 30, 2785-2791. DOI |
23 | Muller CW, Rey FA, Sodeoka M, Verdine GL, and Harrison SC. 1995. Structure of the NF-kappa B p50 homodimer bound to DNA. Nature 373, 311-317. DOI |
24 |
Ndlovu MN, Lint CV, Wesemael KV, Callebert P, Chalbose D, Haegeman G, and Berghe WV. 2009. Hyperactivated |
25 | Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, and Ferrin TE. 2004. UCSF chimera--visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612. DOI |
![]() |