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http://dx.doi.org/10.7845/kjm.2018.8016

Complete genome sequence of Flavivirga eckloniae ECD14T isolated from a seaweed Ecklonia cava  

Lee, Ji Hee (Department of Biology, College of Life Science and Natural Resources, Sunchon National University)
Kang, Joo Won (Department of Biology, College of Life Science and Natural Resources, Sunchon National University)
Kim, Eun Mi (Department of Dental Hygiene, Gwangju Health University)
Seong, Chi Nam (Department of Biology, College of Life Science and Natural Resources, Sunchon National University)
Publication Information
Korean Journal of Microbiology / v.54, no.2, 2018 , pp. 161-163 More about this Journal
Abstract
The genome of Flavivirga eckloniae $ECD14^T$ isolated from a seaweed Ecklonia cava was sequenced. The genome comprises a single circular 5,665,358 bp chromosome with a G + C content of 33.9%, 4,647 total genes, 4,595 protein-coding genes, 44 pseudo genes, and 52 RNA genes. CRISPER genes and sequences were not found and there were some phage remnants and transposons. This strain contains alginate lyase and ${\beta}$-glucosidase genes responsible for the degradation of seaweed polysaccharides.
Keywords
Flavivirga eckloniae; alginate lyase; genome sequence; seaweed;
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