1 |
Seemann, T. 2014. Prokka: Rapid prokaryotic genome annotation. Bioinformatics 30, 2068-2069.
DOI
|
2 |
Shahzad, R., Khan, A.L., Bilal, S., Asaf, S., and Lee, I.J. 2017. Plant growth-promoting endophytic bacteria versus pathogenic infections: An example of Bacillus amyloliquefaciens RWL-1 and Fusarium oxysporum f. sp. lycopersici in tomato. PeerJ. 5, e3107.
DOI
|
3 |
Sommer, D.D., Delcher, A.L., Salzberg, S.L., and Pop, M. 2007. Minimus: a fast, lightweight genome assembler. BMC Bioinformatics 8, 64-75.
DOI
|
4 |
Chin, C.S., Alexander, D.H., Marks, P., Klammer, A.A., Drake, J., Heiner, C., Clum, A., Copeland, A., Huddleston, J., Eichler, E.E., et al. 2013. Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat. Methods 10, 563-569.
DOI
|
5 |
Ruiz-Garcia, C., Bejar, V., Martinez-Checa, F., Llamas, I., and Quesada, E. 2005. Bacillus velezensis sp. nov., a surfactantproducing bacterium isolated from the river Vélez in Málaga, southern Spain. Int. J. Syst. Evol. Microbiol. 55, 191-195.
DOI
|
6 |
Chung, E.J., Hossain, M.T., Khan, A., Kim, K.H., Jeon, C.O., and Chung, Y.R. 2015. Bacillus oryzicola sp. nov., an endophytic bacterium isolated from the roots of rice with antimicrobial, plant growth promoting, and systemic resistance inducing activities in rice. Plant Pathol. J. 31, 152-164.
DOI
|
7 |
Dunlap, C.A., Kim, S., Kwon, S., and Rooney, A.P. 2016. Bacillus velezensis is not a later heterotypic synonym of Bacillus amyloliquefaciens ; Bacillus methylotrophicus, Bacillus amyloliquefaciens subsp. plantarum and "Bacillus oryzicola" are later heterotypic synonyms of Bacillus velezensis, based on phylogenomics. Int. J. Syst. Evol. Microbiol. 66, 1212-1217.
DOI
|
8 |
Eid, J., Fehr, A., Gray, J., Luong, K., Lyle, J., Otto, G., Peluso, P., Rank, D., Baybayan, P., Bettman, B., et al. 2009. Real-time DNA sequencing from single polymerase molecules. Science 323, 133-138.
DOI
|
9 |
Hallmann, J. and Berg, G. 2006. Spectrum and population dynamics of bacterial root endophytes, pp. 15-31. In microbial root endophytes. Springer, Berlin, Heidelberg.
|
10 |
Hossain, M.T., Khan, A., Chung, E.J., Rashid, M.H., and Chung, Y.R. 2016. Biological control of rice bakanae by an endophytic Bacillus oryzicola YC7007. Plant Pathol. J. 32, 228-241.
DOI
|