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http://dx.doi.org/10.7845/kjm.2016.6040

Microbial community structure analysis from Jeju marine sediment  

Koh, Hyeon Woo (Department of Biology, Jeju National University)
Rani, Sundas (Department of Biology, Jeju National University)
Hwang, Han-Bit (Department of Biology, Jeju National University)
Park, Soo-Je (Department of Biology, Jeju National University)
Publication Information
Korean Journal of Microbiology / v.52, no.3, 2016 , pp. 375-379 More about this Journal
Abstract
In this study, the structure and diversity of bacterial community were investigated in the surface and subsurface marine sediments using a NGS method (i.e. illumina sequencing technology). The bacterial community in the surface was distinct from that in the subsurface of marine sediment; with the exception of the phylum Proteobacteria, the relative abundance of Bacteroides phylum were higher in the surface than subsurface, whereas the sequences affiliated to the phyla Chloroflexi and Acidobacteria were relatively more copious in the subsurface than surface sediment. Moreover, interestingly, we observed that the phyla Nitrospinae and Nitrospirae contribute to nitrogen cycle in the marine sediment. This study may present the possibility for the presence of novel microorganisms as unexplored sources and provide basic information on the microbial community structure.
Keywords
bacteria; community; marine sediment; next-generation sequencing;
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