Browse > Article

Change of Microbial Communities in Kimchi Fermentation at Low Temperature  

박정아 (한국생명공학연구원)
허건영 (한국생명공학연구원)
이정숙 (한국생명공학연구원)
오윤정 (한국생명공학연구원)
김보연 (한국생명공학연구원)
민태익 (한국생명공학연구원)
김치경 (충북대학교 미생물학과)
안종석 (한국생명공학연구원)
Publication Information
Korean Journal of Microbiology / v.39, no.1, 2003 , pp. 45-50 More about this Journal
Abstract
The diversity and change of microbial communities during kimchi fermentation at $4^{\circ}C$ were analyzed by denaturing gradient gel electrophoresis (DGGE). Kimchi samples were taken every 5 days over the fermentation periods (for 60 days) to extract total DNA for DGGE analysis. Touchdown polymerase chain reaction was performed to amplify the V3 region of 16S rRNA gene. Sequencing results of partial 16S rDNA amplicons from DGGE profiles revealed that lactic acid bacteria (LAB), especially Weissella koreensis, Lactobacillus sakei and Leuconostoc gelidum were dominants in kimchi fermentation at $4^{\circ}C$. And we knew that W. koreensis steadily existed throughout the whole fermentation period, also Lb. sakei and Leuc. gelidum appeared from 10th day and 30th day of fermentation time, respectively and then these species were to be dominant microorganisms.
Keywords
DGGE; kimchi; lactic acid bacteria; 16S rDNA;
Citations & Related Records
Times Cited By KSCI : 2  (Citation Analysis)
연도 인용수 순위
1 Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations. /
[ Ampe, F.;N.B. Omar;C. Moizan;C. Wacher;J.P. Guyot ] / Appl. Environ. Microbiol.
2 A molecular view of the intestinal ecosystem /
[ Vaughan, E.E.;F. Schut;H.G.H.J. Heilig;E.G. Zoetendal;W.M. de Vos;A.D.L. Akkermans ] / Curr. Issues Intest. Microbiol.
3 Length-independent separation of DNA restriction fragments in two dimensional gel electrophoresis /
[ Fischer, S.G.;L.S. Lerman ] / Cell.   DOI   ScienceOn
4 /
[ Flesentein, J. ] / PHYLIP (phylogeny inference package)(version 3.5c)
5 Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription PCR in temperature gradient gel electrophoresis fingerprints. /
[ Felske, A.;A.D.L. Akkermans;W.M. de Vos ] / Appl. Environ. Microbiol.
6 부추김치와 배추김치 발효양상 /
[ 안순철;김태강;이헌주;오윤정;이정숙;강대욱;오원근;민태익;안종석 ] / 한국미생물학회지   과학기술학회마을
7 김치발효 중의 젖산균의 경시적 변화 및 분리 젖산균의 동정 /
[ 이철우;고창령;하덕모 ] / 한국산업미생물학회지   과학기술학회마을
8 파김치와 배추김치의 발효양상 /
[ 이헌주;주윤정;박찬선;이정숙;박용하;민태익;안종석 ] / 한국식품과학회지
9 DNA-based, culture-independent strategies for evaluating microbial communities in food-associated ecosystems /
[ Giraffa, G.;N. Erasmo ] / Int. J. Food Microbiol.   DOI   ScienceOn
10 김치에서 분리한 저온성 젖산균의 동정 /
[ 소명환;김영배 ] / 한국식품과학회지
11 Detection and characterization of lactose-utilizing Lactococcus subsp. in a natural ecosystem. /
[ Klijn, N.;A.H. Weerkamp;W.M. de Vos ] / Appl. Environ. Microbiol.
12 Evolution of protein molecules /
[ Jukes, T.H.;C.R. Cantor;H.N. Munro(ed.) ] / Mammalian Protein Metabolism
13 Computational simulation of DNA melting and its application to denaturing gradient gel electrophoresis /
[ Lerman, L.S.;K. Silverstein ] / Methods Enzymol.   DOI
14 Diversity, dynamics, and activity of bacterial communities during production of an artisanal Sicilian cheese as evaluated by 16S rRNA analysis. /
[ Randazzo, C.L.;S. Torriani;A.D.L. Akkermans;W.M.D. Vos;E.E. Vaughan ] / Appl. Environ. Microbiol.   DOI   ScienceOn
15 Phylogenetic identification and in situ detection of individual microbial cells without cultivation /
[ Amann, R.I.;W. Ludwig;K.H. Schleiffer ] / Microbiol. Rev.
16 Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria /
[ Zoetendal, E.G.;A.D.L. Akkermans;W.M. de Vos ] / Appl. Environ. Microbiol.
17 Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples /
[ Miller, D.N.;J.E. Bryant;E.L. Madsen;W.C. Ghiorse ] / Appl. Environ. Microbiol.
18 Profiling of complex microbial communities populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA /
[ Muyzer, G.;E.C. de Waal;A.G. Uitterlinden ] / Appl. Environ. Microbiol.
19 Leuconostoc gelidum sp. nov. and Leuconostoc carnosum from chill-stored meats. /
[ Shaw, B.G.;C.D. Harding ] / Int. J. Syst. Bacteriol.   DOI
20 Effect of temperature and salt concentration on kimchi fermentation /
[ Mheen, T.I.;T.W. Kwon ] / Kor. J. Food Sci. Technol.
21 Weissella koreensis sp. nov., isolated from kimchi /
[ Lee, J.S.;K.C. Lee;J.S. Ahn;T.I. Mheen;Y.R. Pyun;Y.H. Park ] / Int. J. Syst. Evol. Microbiol.   DOI   ScienceOn