Plastid genome of Aster altaicus var. uchiyamae Kitam., an endanger species of Korean asterids |
Park, Jihye
(Green Plant Institute, B-301, Heungdeok IT Valley)
Shim, Jaekyung (Green Plant Institute, B-301, Heungdeok IT Valley) Won, Hyosig (Department of Biological Science, Daegu University) Lee, Jungho (Green Plant Institute, B-301, Heungdeok IT Valley) |
1 | Besendahl, A., Y.L. Qiu, J. Lee, J.D. Palmer and D. Bhattacharya. 2000. The endosymbiotic origin and vertical evolution of the plastid tRNA Leu group I intron. Curr. Genet. 37:12-23. DOI |
2 | Chen, Y., L. Brouillet and J.C. Semple. 2008. Aster Linnaeus. Flora of China. In eFloras (2008). Published on the Internet http://www.efloras.org |
3 | Choi, K.S. and S. Park. 2015. The complete chloroplast genome sequence of Aster spathulifolius (Asteraceae); genomic features and relationship with Asteraceae. Gene 572:214-221. DOI |
4 | Chung, G.Y. and Y.S. Kim. 1991a. A taxonomic study of pappus morphology on the genus Aster. L., and its allied groups in Korea. Kor. J. Plant Tax. 21(3):197-209. DOI |
5 | Chung, G.Y. and Y.S. Kim. 1991b. A taxonomic study of the receptacle morphology on the genus Aster. L., and its allied groups in Korea. Kor. J. Plant Tax. 21(4):229-238. DOI |
6 | Chung, G.Y. and Y.S. Kim. 1991c. A study on epidermal cells of the ligulate florets of the genus Aster. L., and its allied groups in Korea. Kor. J. Plant Tax. 21(4):239-250. DOI |
7 | Chung, G.Y. and Y.S. Kim. 1993a. A study on the capitulum morphology of the genus Aster. L., and its allied taxa in Korea. Kor. J. Plant Tax. 23(3):105-118. DOI |
8 | Chung, G.Y. and Y.S. Kim. 1993b. A taxonomic study of Korean Aster. L., and its allied taxa on the anatomical characters. Kor. J. Plant Tax. 23(3):119-130. DOI |
9 | Conant, G.C. and K.H. Wolfe. 2008. GenomeVx: simple web-based creation of editable circular chromosome maps. Bioinformatics 24:861-862. DOI |
10 | Dong, W., C. Xu, C. Li, J. Sun, Y. Zuo, S. Shi, T. Chang, J. Guo and S. Zhou. 2015. ycf1, the most promising plastid DNA barcode of land plants. Sientific Report 5:8348. DOI |
11 | Fraser, K.A., L. Pachter, A. Poliakov, E.M. Rubin and I. Dubchak. 2004. VISTA: computational tools for comparative genomics. Nucleic Acids Research 32:W273-W279. DOI |
12 | Hong, S.-Y., K.-S. Cho and K.-O. Yoo. 2012. Phylogenetic Analysis of Korean Native Aster Plants Based on Internal Transcribed Spacer (ITS) Sequences. Kor. J. Hort. Sci. Technol. 30(2):178-184. |
13 | Ito, M., A. Soejima and T. Nishino. 1994. Phylogeny and speciation of Asian Aster. Kor. J. Plant Tax. 24(3):133-143. DOI |
14 | Laslett, D. and B. Canback. 2004. ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. Nucleic Acids Res. 32:11-16. DOI |
15 | Ito, M., A. Soejima, M. Hasebe and K. Watanabe. 1995. A Chloroplast-DNA Phylogeny of Kalimeris and Aster, with Reference to the Generic Circumscription. J. Plant Res. 108:93-96. DOI |
16 | Ito, M., A. Soejima and K. Watanabe. 1998. Phylogenetic Relationships of Japanese Aster (Asteraceae, Astereae) sensu lato Based on Chloroplast-DNA Restriction Site Mutations. J. Plant Res. 111:217-223. DOI |
17 | Kitamura, S. 1937. Aster altaicus Willd., var. Uchiyamae Kitamura var. nov. Memoirs of the College of Science, Kyoto Imperial University, Series B. pp. 367-368. |
18 | Lee, J. and J.R. Manhart. 2002a. Four embryophyte introns and psbB operon explains Chlorokybus as a basal lineage of streptophytes. Algae 17(1):53-58. DOI |
19 | Lee, M., J. Park, H. Lee, S.-H. Sohn and J. Lee. 2015. Complete chloroplast genomic sequence of Citrus platymamma determined by combined analysis of Sanger and NGS data. Hortic. Environ. Biotechnol. 56(5):704-711. DOI |
20 | Li, X., Y. Yang, R.J. Henry, M. Rosseto, Y. Wang and S. Chen. 2015. Plant DNA barcoding: from gene to genome. Biol. Rev. 90:157-166. DOI |
21 | Lowe, T.M. and S.R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964. DOI |
22 | Park, C.-W. 2007. The Genera of Vascular Plants of Korea. Academy Publishing Co., Seoul. |
23 | Park, J.H. and J. Lee. 2016. The complete plastid genome of Scopolia parviflora (Dunn.) Nakai (Solanaceae). Korean J. Pl. Taxon. 46(1):70-74. |
24 | Lee, J. and J.R. Manhart. 2002b. The Chloroplast rpl23 gene cluster of Spirogyra maxima (Charophyceae) shares many similarities with the angiosperm rpl23 operon. Algae 17(1):59-68. DOI |
25 | Park, S.K., S.-J. Kwon, J. Park, M. Lee, S.Y. Won, Y.C. Kim, Y.-J. Hwang, S.-H. Sohn and J. Lee. 2015. Chloroplast genome of white wild chrysanthemum, Dendranthema sp. K247003, as genetic barcode. Journal of Species Research 4(2):152-158. DOI |
26 | Suh, Y.B. and Y.J. Kim. 2014. Korean Red List of Threatened Species. 2nd ed. National Institute of Biological Resources, Korea. |
27 | Timme, R.E., V.K. Jennifer, L.B. Jefferey and K.J. Robert. 2007. A comparative analysis of the Lactuca and Helianthus (Asteraceae) plastid genomes: Identification of divergent regions and categorization of shared repeats. American Journal of Botany 94(3):302-312. DOI |
28 | Wyman, S.K., R.K. Jansen and J.L. Boore. 2004. Automatic annotation of organellar genomes with DOGMA. Bioinformatics 20:3252-3255. DOI |