A report of 38 unrecorded bacterial species in Korea, belonging to the phylum Actinobacteria |
Kim, Mi-Sun
(Department of Biology, Sunchon National University)
Lee, Ji-Hee (Department of Biology, Sunchon National University) Kang, Joo-Won (Department of Biology, Sunchon National University) Kim, Seung-Bum (Department of Microbiology, Chungnam National University) Cho, Jang-Cheon (Department of Biological Sciences, Inha University) Yoon, Jung-Hoon (Department of Food Science and Biotechnology, Sungkyunkwan University) Joh, Ki-seong (Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies) Cha, Chang-Jun (Department of Biotechnology, Chung-Ang University) Im, Wan-Taek (Department of Biotechnology, Hankyong National University) Bae, Jin-Woo (Department of Biology, Kyung Hee University) Jahng, Kwang-Yeop (Department of Life Sciences, Chonbuk National University) Jeon, Che-Ok (Department of Life Science, Chung-Ang University) Seong, Chi-Nam (Department of Biology, Sunchon National University) |
1 | Bressan, W. 2003. Biological control of maize seed pathogenic fungi by use of actinomycetes. Biocontrol 48(2):233-240. DOI |
2 | Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution 17(6):368-376. DOI |
3 | Felsenstein, J. 1985. Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39:783-791. DOI |
4 | Fitch, W.M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20:406-416. DOI |
5 | Gordon, R.E. and J.M. Mihm. 1962. Identification of Nocardia caviae (Erikson) nov. comb. Ann. N. Y. Acad. Sci. 98:628-636. |
6 | Gupte, M., P. Kulkarni and B.N. Ganguli. 2002. Antifungal antibiotics. Appl Microbiol Biotechnol. 58(1):46-57. DOI |
7 | Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98. |
8 | Jukes, T.H. and C.R. Cantor. 1969. Evolution of protein mole cules. In: H. N. Munro (ed.), Mammalian Protein Metabolism. Academic Press, New York, pp. 21-132. |
9 | Kim, O.S., Y.J. Cho, K. Lee, S.H. Yoon, M. Kim, H. Na, S.C. Park, Y.S. Jeon, J.H. Lee, H. Yi, S. Won and J. Chun. 2012. Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int. J. Syst. Evol. Microbiol. 62(3):716-721. DOI |
10 | Mahajan, G.B. 2012. Antibacterial agents from actinomycetes - a review. Frontiers in Bioscience 4:240-253. |
11 | Miao, V. and J. Davies. 2010. Actinobacteria: the good, the bad and the ugly. Antonie Van Leeuwenhoek 98(2):143-150. DOI |
12 | Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4(4):406-425. |
13 | Servin, J.A., C.W. Herbold, R.G. Skophammer and J.A. Lake. 2008. Evidence excluding the root of the tree of life from the actinobacteria. Molecular Biology and Evolution 25(1):1-4. DOI |
14 | Tamura, K., G. Stecher, D. Peterson, A. Filipski and S. Kumar. 2013. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution 30(12):2725-2729. DOI |
15 | Thompson, J.D., D.G. Higgins and T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680. DOI |
16 | Ventura, M., C. Canchaya, A. Tauch, G. Chandra, G.F. Fitzgerald, K.F. Chater and D. van Sinderen. 2007. Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. Microbiol Mol Biol Rev 71(3):495-548. DOI |