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http://dx.doi.org/10.12651/JSR.2015.4.2.109

A report of 39 unrecorded bacterial species in Korea, belonging to the Betaproteobacteria and Gammaproteobacteria  

Choi, Ahyoung (Department of Biological Sciences, Inha University)
Bae, Jin-Woo (Department of Biology, Kyung Hee University)
Cha, Chang-Jun (Department of Biotechnology, Chung-Ang University)
Chun, Jongsik (School of Biological Sciences, Seoul National University)
Im, Wan-Taek (Department of Biotechnology, Hankyong National University)
Jahng, Kwang Yeop (Department of Life Sciences, Chonbuk National University)
Jeon, Che Ok (Department of Life Science, Chung-Ang University)
Joh, Kiseong (Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies)
Kim, Seung Bum (Department of Microbiology, Chungnam National University)
Seong, Chi Nam (Department of Biology, Sunchon National University)
Yoon, Jung-Hoon (Department of Food Science and Biotechnology, Sungkyunkwan University)
Cho, Jang-Cheon (Department of Biological Sciences, Inha University)
Publication Information
Journal of Species Research / v.4, no.2, 2015 , pp. 109-126 More about this Journal
Abstract
As a subset study to discover indigenous prokaryotic species in Korea, a total of 39 bacterial strains assigned to the classes Betaproteobacteria and Gammaproteobacteria were isolated from diverse environmental samples collected from soil, tidal flat, freshwater, seawater, seaweed, wetland, plant roots, guts of insects, and fermented foods. From the high 16S rRNA gene sequence similarity (>99.1%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to each independent and predefined bacterial species. There is no official report that these 39 species have been described in Korea; therefore 4 species of 4 genera in the order Burkholderiales and 1 species in the order Neisseriales within the class Betaproteobacteria, and 10 species of 6 genera in the order Alteromonadales, 11 species of 3 genera in the order Pseudomonadales, 4 species of 4 genera in the order Enterobacteriales, 2 species of 2 genera in the order Vibrionales, 1 species in the order Aeromonadales, 3 species of 3 genera in the order Oceanospirillales, 2 species of 2 genera in the order Xanthomonadales, and 1 species in the order Chromatiales within the Gammaproteobacteia are reported for proteobacterial species found in Korea. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs are also described in the species description section.
Keywords
16S rRNA; bacterial diversity; Betaproteobacteria; Gammaproteobacteria; unrecorded species;
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