Exploring Responses to Light in the Monocot Model Plant, Brachypodium distachyon |
Tran, Quynh-Giao
(Department of Biotechnology and Kumho Life Science Laboratory, Chonnam National University)
Han, Yun-Jeong (Department of Biotechnology and Kumho Life Science Laboratory, Chonnam National University) Hwang, Ok-Jin (Department of Biotechnology and Kumho Life Science Laboratory, Chonnam National University) Hoang, Quyen T.N. (Department of Biotechnology and Kumho Life Science Laboratory, Chonnam National University) Kim, Jeong-Il (Department of Biotechnology and Kumho Life Science Laboratory, Chonnam National University) |
1 | Barrero, J.M., J.V. Jacobsen, M.J. Talbot, R.G. White, S.M. Swain, D.F. Garvin and F. Gubler. 2012. Grain dormancy and light quality effects on germination in the model grass Brachypodium distachyon. New Phytol. 193:376-386. DOI |
2 | Brkljacic, J., E. Grotewold, R. Scholl, T. Mockler, D.F. Garvin, P. Vain, T. Brutnell, R. Sibout, M. Bevan, H. Budak, A.L. Caicedo, C. Gao, Y. Gu, S.P. Hazen, B.F. Holt III, S.-Y. Hong, M. Jordan, A.J. Manzaneda, T. Mitchell-Olds, K. Mochida, L.A. Mur, C.-M. Park, J. Sedbrook, M. Watt, S.J. Zheng and J.P. Vogel. 2011. Brachypodium as a model for the grasses: today and the future. Plant Physiol. 157:3-13. DOI |
3 | Catalan, P., B. Chalhoub, V. Chochois, D.F. Garvin, R. Hasterok, A.J. Manzaneda, L.A. Mur, N. Pecchioni, S.K. Rasmussen, J.P. Vogel and A. Voxeur. 2014. Update on the genomics and basic biology of Brachypodium. Trends Plant Sci. 19:414-418. |
4 | Chambers, J.P., A. Behpouri, A. Bird and C.K. Ng. 2012. Evaluation of the use of the polyubiquitin genes, Ubi4 and Ubi10 as reference genes for expression studies in Brachypodium distachyon. PloS One 7:e49372. DOI |
5 | Draper, J., L.A. Mur, G. Jenkins, G.C. Ghosh-Biswas, P. Bablak, R. Hasterok and A.P. Routledge. 2001. Brachypodium distachyon. A new model system for functional genomics in grasses. Plant Physiol. 127:1539-1555. DOI |
6 | Fankhauser, C. and J.J. Casal. 2004. Phenotypic characterization of a photomorphogenic mutant. Plant J. 39:747-760. DOI |
7 | Ganesan, M., H.-Y. Lee, J.-I. Kim and P.-S. Song. 2017. Development of transgenic crops based on photo-biotechnology. Plant Cell Environ. 40:2469-2486. DOI |
8 | Garvin, D.F., Y.Q. Gu, R. Hasterok, S.P. Hazen, G. Jenkins, T.C. Mockler, L.A.J. Mur and J.P. Vogel. 2008. Development of genetic and genomic research resources for Brachypodium distachyon, a new model system for grass crop research. Crop Sci. 48:S69-S84. DOI |
9 | Han, Y.-J., P.-S. Song and J.-I. Kim. 2007. Phytochrome-mediated photomorphogenesis in plants. J. Plant Biol. 50:230-240. DOI |
10 | Hong, S.-Y., J.-H. Park, S.-H. Cho, M.-S. Yang and C.-M. Park. 2011. Phenological growth stages of Brachypodium distachyon: codification and description. Weed Res. 51:612-620. DOI |
11 | Keller, B. and C. Feuillet. 2000. Colinearity and gene density in grass genomes. Trends Plant Sci. 5:246-251. DOI |
12 | Kellogg, E.A. 2015. Brachypodium distachyon as a genetic model system. Annu. Rev. Genet. 49:1-20. DOI |
13 | Li, J., G. Li, H. Wang and X.W. Deng. 2011. Phytochrome signaling mechanisms. Arabidopsis Book 9:e0148. DOI |
14 | Opanowicz, M., P. Vain, J. Draper, D. Parker and J.H. Doonan. 2008. Brachypodium distachyon: making hay with a wild grass. Trends Plant Sci. 13:172-177. DOI |
15 | Scholthof, K.G., S. Irigoyen, P. Catalan and K. Mandadi. 2018. Brachypodium: A monocot grass model system for plant biology. Plant Cell in press (doi:10.1105/tpc.18.00083). DOI |
16 | Shin, A.-Y., Y.-J. Han, A. Baek, T. Ahn, S.Y. Kim, T.S. Nguyen, M. Son, K.W. Lee, Y. Shen, P.-S. Song and J.-I. Kim. 2016. Evidence that phytochrome functions as a protein kinase in plant light signalling. Nature Comm. 7:11545. DOI |
17 | Takano, M., H. Kanegae, T. Shinomura, A. Miyao, H. Hirochika and M. Furuya. 2001. Isolation and characterization of rice phytochrome A mutants. Plant Cell 13:521-534. DOI |
18 | The International Brachypodium Initiative. 2010. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463:763-768. DOI |
19 | Tyler, L., J.U. Fangel, A.D. Fagerstrom, M.A. Steinwand, T.K. Raab, W.G. Willats and J.P. Vogel. 2014. Selection and phenotypic characterization of a core collection of Brachypodium distachyon inbred lines. BMC Plant Biol. 14:25. DOI |
20 | Vogel, J. and T. Hill. 2008. High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3. Plant Cell Rep. 27:471-478. DOI |
21 | Woods, D.P., T.S. Ream, G. Minevich, O. Hobert and R.M. Amasino. 2014. PHYTOCHROME C is an essential light receptor for photoperiodic flowering in the temperate grass, Brachypodium distachyon. Genetics 198:397-408. DOI |
22 | Xu, X., I. Paik, L. Zhu and E. Huq. 2015. Illuminating progress in phytochrome-mediated light signaling pathways. Trends Plant Sci. 20:641-650. DOI |
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