Screening of Rice Germplasm for the Distribution of Rice Blast Resistance Genes and Identification of Resistant Sources |
Ali, Asjad
(National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA)
Hyun, Do-Yoon (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) Choi, Yu-Mi (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) Lee, Sukyeung (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) Oh, Sejong (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) Park, Hong-Jae (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) Lee, Myung-Chul (National Agrobiodiversity Center, National Institute of agricultural Sciences, RDA) |
1 | Abe, S. 2004. Breeding of a blast resistant multiline variety of rice, Sasanishiki BL. Jpn. Agr. Res. Q. 38:149-154. DOI |
2 | Ashikawa, I., N. Hayashi, H. Yamane, H. Kanamori, J. Wu, T. Matsumoto, K. Ono and M. Yano. 2008. Two adjacent nucleotide binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance. Genetics 180(4):2267-2276. DOI |
3 | Ballini, E., J.B. Morel, G. Droc, A. Price, B. Courtois, J.L. Notteghem and D. Tharreau. 2008. A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance. Mol. Plant Microbe In. 21:859-868. DOI |
4 | Chen, X.W., J.J. Shang, D.X. Chen, C. Lei, Y. Zou, W. Zhai, G. Liu, J. Xu, Z. Ling, G. Cao, B. Ma, Y. Wang, X. Zhao, S. Li and L. Zhu. 2006. A B-lectin receptor kinase gene conferring rice blast resistance. Plant J. 46:794-804. DOI |
5 | Gamuyao, R., J.H. Chin, J. Pariasca-Tanaka, P. Pesaresi, S. Catausan, C. Dalid, I. Slamet-Loedin, E.M. Tecson-Mendoza, M. Wissuwa and S. Heuer. 2012. The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency. Nature 488:535-541. DOI |
6 | Han, S.S., J.D. Ryu, H. S. Shim, S.W. Lee, Y.K. Hong and K.H. Cha. 2001. Breakdown of resistant cultivars by new race KI-1117a and race distribution of rice blast fungus during 1999-2000 in Korea. Res. Plant Dis. 7:86-92. |
7 | Hayashi, K. and H. Yoshida. 2009. Refunctionalization of the ancient rice blast disease resistance gene Pit by the recruitment of a retrotransposon as a promoter. Plant J. 57(3):413-425. doi:10.1111/j.1365-313X.2008.03694. DOI |
8 | Hayashi, K., H. Yoshida and I. Ashikawa. 2006. Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes. Theor. Appl. Genet. 113:251-260. DOI |
9 | Hayashi, K., N. Hashimoto, M. Daigen and I. Ashikawa. 2004. Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus. Theor. Appl. Genet. 108(7):1212-1220. DOI |
10 | Jeung, J.U., B.R. Kim, Y.C. Cho, S.S. Han, H.P. Moon, Y.T. Lee and K.K. Jena. 2007. A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice. Theor. Appl. Genet. 115(8):1163-1177. doi:10.1007/s00122-007-0642-x. DOI |
11 | Jia, Y. 2009. A user-friendly method to isolate and single spore the fungi Magnaporthe oryzae and Magnaporthe grisea obtained from diseased field samples Plant Health Prog. http://dx.doi.org/10.1094/PHP-2009-1215-01-BR DOI |
12 | Jia, Y., Z. Wang and P. Singh. 2002. Development of dominant rice blast Pi-ta resistance gene markers. Crop Sci. 42:2145-2149. DOI |
13 | Kelly, J.D. 1995. Use of RAPD markers in breeding for major gene resistance to plant pathogens. Hortic. Sci. 30:461-465. |
14 | Khush, G.S. 2004. Harnessing science and technology for sustainable rice-based production systems. Proceedings of FAO Rice Conference "Rice is life". Int. Rice Comm. Newsl. 53: 17-23. |
15 | Khush, G.S. and K. Jena. 2009. Current status and future prospects for research on blast resistance in rice (Oryza sativa L.): In Wang, X. and B. Valent (eds.), Advances in Genetics, Genomics and Control of Rice Blast Disease, Springer, Dordrecht, The Netherlands. pp. 1-10. |
16 | Kim, J.S., S.G. Ahn, C.K. Kim and C.K. Shim. 2010. Screening of rice blast resistance genes from aromatic rice germplasms with SNP markers. Plant Pathol. J. 26:70-79. DOI |
17 | Li, J., Y. Sun, H. Liu, Y. Wang, Y. Jia and M. Xu. 2013. Genetic variation and evolution of the Pit blast resistance locus in rice. Genet. Resour. Crop Evol. doi:10.1007/s10722-013-0051-8. DOI |
18 | Kiyosawa, S. 1987. With genetic view on the mechanism of resistance and virulence. Jpn. J. Iden. 41:89-92 (in Japanese). |
19 | Lee, S.K., M.Y. Song, Y.S. Seo, H.K. Kim, S. Ko, P.J. Cao, J.P. Suh, G. Yi, J.H. Roh, S. Lee, G. An, T.R. Hahn, G.L. Wang, P. Ronald and J.S. Jeon. 2009. Rice Pi5-mediated resistance to Magnaporthe oryzae requires the presence of two coiled-coil-nucleotide-binding-leucine-rich repeat genes. Genetics 181(4):1627-1638. DOI |
20 | Li, Y.B., C.J. Wu, G.H. Jiang, L.Q. Wang and Y.Q. He. 2007. Dynamic analyses of rice blast resistance for the assessment of genetic and environmental effects. Plant Breed. 126:541-547. DOI |
21 | Liu, G., G. Lu, L. Zeng and G.L. Wang. 2002. Two broadspectrum blast resistance genes, Pi9(t) and Pi2(t), are physically linked on rice chromosome 6. Mol. Genet. Genomics 267(4):472-480. doi:10.1007/s00438-002-0677-2. DOI |
22 | Liu, X., Q. Yang, F. Lin, L. Hua, C. Wang, L. Wang and Q. Pan. 2007. Identification and fine mapping of Pi39(t), a major gene conferring the broad-spectrum resistance to Magnaporthe oryzae. Mol. Genet. Genomics 278(4):403-410. doi:10.1007/s00438-007-0258-5. DOI |
23 | Padmanabhan, S.Y. 1965. Estimating losses from rice blast in India. Pages 203-221 in the rice blast disease. Proceeding of symposium at IRRI July 1963. The Johns hopkin press, Baltimore, Maryland. |
24 | Pink, D.A.C. 2002. Strategies using genes for non-durable resistance. Euphytica 1:227-236. |
25 | Sharma, T.R., A.K. Rai, S.K. Gupta, J. Vijayan, B.N. Devanna and S. Ray. 2012. Rice blast management through host-plant resistance: retrospect and prospects. Agric. Res. 1:37-52. DOI |
26 | Qu, S., G. Liu, B. Zhou, M. Bellizzi, L. Zeng, L. Dai, B. Han and G.L. Wang. 2006. The broad-spectrum blast resistance gene Pi9 encodes a nucleotide-binding site-leucine-rich repeat protein and is a member of a multigene family in rice. Genetics 172:1901-1914. DOI |
27 | Rath, G. and S.Y. Padmanabhan. 1972. Cytoplasmic effect on the leaf blast reaction in rice. Curr. Sci. 41:338-339. |
28 | Shankar, R., B.G. Bagle and T.A. More. 2009. Diversity analysis of bitter gourd (Momordica charantia L.) germination from tribal belts of India. Asian & Australian J. Plant Sci. Biotech. pp. 21-25. |
29 | Shikari, A.B., A. Khanna, S.G. Krishnan, U.D. Singh, R. Rathour, V. Tonapi, T.R. Sharma, M. Nagarajan, K.V. Prabhu and A.K. Singh. 2013. Molecular analysis and phenotypic validation of blast resistance genes Pita and Pita2 in landraces of rice (Oryza sativa L.). Indian J. Genet. 73:131-141. |
30 | Song, C., G. Wang, N. Liu and X. Zhou. 2009. The classification of some species of rice in Heilongjiang province based on its resistance to the blast. Chin. Agric. Sci. Bull. 25:201-205. |
31 | Song, J.Y., G.A. Lee, Y.M. Choi, S. Lee, K.B. Lee, C.H. Bae, Y. Jung, D.Y. Hyun, H.J. Park and M.C. Lee. 2014. Blast resistant genes distribution and resistance reaction to blast in Korean landraces of rice (Oryza sativa L.). Korean J. Plant Res. 27(6):687-700. DOI |
32 | Variar, M., C.M. Vera Cruz, M.G. Carrillo, J.C. Bhatt and R.B.S. Sangar. 2009. Rice blast in India and strategies to develop durably resistant cultivars: In Xiaofan, W. and B. Valent (eds.), Advances in Genetics, Genomics and Control of Rice Blast Disease. Springer, New York, USA. pp. 359-374. |
33 | Chen, X.W., S.G. Li, J.C. Xu, W.X. Zhai, Z.Z. Ling, B.T. Ma, Y.P. Wang, W.M. Wang, G. Cao, Y.Q. Ma, J.J. Shang, X.F. Zhao, K.D. Zhou and L.H. Zhu. 2004. Identification of two blast resistance genes in a rice variety, Digu. J. Phytopathol. 152:77-85. DOI |
34 | Cho, Y.C., J.U. Jeung, H.J. Park, C.I. Yang, Y.H. Choi, I.B. Choi, Y.J. Won, S.J. Yang and Y.G. Kim. 2008. Haplotype diversity and durability of resistance genes to blast in Korean Japonica rice varieties. J. Crop Sci. Biotechnol. 11:205-214. |
35 | Cho, Y.C., S.W. Kwon, I.S. Choi, S.K. Lee, J.S. Jeon, M.K. Oh, J.H. Roh, H.G. Hwang, S.J. Yang and Y.G. Kim. 2007. Identification of major blast resistance genes in Korean rice varieties (Oryza sativa L.) using molecular markers. J. Crop Sci. Biotechnol. 10(4):265-276. |
36 | Higashi, T. and S. Saito. 1985. Linkage of field resistance genes of upland rice variety 'Sensho' to leaf blast caused by Pyricularia oryzae Cav. Jpn. J. Breed. 35: 438-448. DOI |
37 | Imam, J., S. Alam, N.P. Mandal, M. Variar and P. Shukla. 2014. Molecular screening for identification of blast resistance genes in North East and Eastern Indian rice germplasm (Oryza sativa L.) with PCR based makers. Euphytica 196:199-211. DOI |
38 | Kiyosawa, S. 1974. Studies on genetics and breeding of blast resistance in rice. Misc. Publ. Natl. Inst. Agric. Sci. 1:1-58 (in Japanese). |
39 | Tanksley, S.D. and S.R. Mc-Couch. 1997. Seeds banks and molecular maps: unlocking genetic potential from the wild. Science 277:1063-1066. DOI |
40 | Tsunematsu, H., M.J.T. Yanoria, L.A. Ebron, N. Hayashi, I. Ando, H. Kato, T. Imbe and G. S. Khush. 2000. Development of monogenic lines of rice for blast resistance. Breed. Sci. 50: 229-234. DOI |
41 | Wang, G.L., D.J. Mackill, J.M. Bonman, S.R. McCouch, M.C. Champoux and R.J. Nelson. 1994. RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar. Genetics 136:1421-1434. |
42 | Wang, L., X.K. Xu, F. Lin and Q.H. Pan. 2009. Characterization of rice blast resistance genes in the Pik cluster and Wne mapping of the Pik-p locus. Phytopathology 99:900-905. DOI |
43 | Yang, J.Y., S. Chen, L.X. Zeng, Y.L. Li, Z. Chen, C.Y. Li and X.Y. Zhu. 2008. Race specificity of major rice blast resistance genes to Magnaporthe grisea isolates collected from indica rice in Guangdong, China. Rice Sci. 15:311-318. DOI |
44 | Zhai, C., F. Lin, Z. Dong, X. He, B. Yuan, X. Zeng, L. Wang and Q. Pan. 2011. The isolation and characterization of Pik, a rice blast resistance gene which emerged after rice domestication. New Phytol. 189:321-334. DOI |
45 | Zhu, Y., H. Chen, J. Fan, Y. Wang, Y. Li, J. Chen, J. Fan, S. Yang, L. Hu, H. Leung, T.W. Mew, P.S. Teng, Z. Wang and C.C. Mundt. 2000. Genetic diversity and disease control in rice. Nature 406:718-722. DOI |
![]() |