Browse > Article

Introgression of Oryza minuta into Rice, Oryza sativa  

Jin Feng Xue (Department of Agronomy, Chungnam National University)
Kang Kyung-Ho (Genetics & Breeding Division, National Institute of Crop Science)
Kwon Soo-Jin (National Institute of Agricultural Biotechnology)
Jeong Oh-Young (Genetics & Breeding Division, National Institute of Crop Science)
Le Heung Linh (Department of Agronomy, Chungnam National University)
Moon Huhn-Pal (Genetics & Breeding Division, National Institute of Crop Science)
Ahn Sang-Nag (Department of Agronomy, Chungnam National University)
Publication Information
KOREAN JOURNAL OF CROP SCIENCE / v.49, no.6, 2004 , pp. 533-538 More about this Journal
Abstract
An introgression line, WH79006 was produced from a single plant from $BC_5F_3$ families from a cross between Hwaseongbyeo used as a recurrent parent and O. minuta (BBCC, Ace. No. 101154) as a donor parent, which was subsequently self-pollinated for three generations. WH79006 resembled the O. sativa parent, Hwaseongbyeo. However it differed from Hwaseongbyeo in several traits including days to heading, culm length, grain size, spikelets per panicle and fertility. These differences in the traits between WH79006 and Hwaseongbyeo can be attributed to the O. minuta introgressions. To detect the introgressions, 294 SSR markers of known chromosomal position have been used. At least, 28 introgressed chromosomal segments have been identified using SSR markers and they map to all chromosomes except chromosome 2. The size of the introgressed segments ranged from 4 to 35cM. A QTL related to culm length was detected using 75 $F_2$ plants from the Hwaseongbyeo/WH79006 cross. This QTL, cl6 located on chromosome 6 explained $9.6\%$ of the total phenotypic variation in the population. This QTL has not been detected in the previous QTL studies between Oryza sativa cultivars, indicating potentially novel alleles from O. minutan.
Keywords
interspecific cross; introgression; Oryza minuta; Oryza sativa; SSRs (simple sequence repeats);
Citations & Related Records
Times Cited By KSCI : 2  (Citation Analysis)
연도 인용수 순위
1 Chen,X, S. Temnykh, Y. Xu,Y G Cho, and S R McCouch 1997 Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L) Theor Appl Genet. 95 553-567   DOI   ScienceOn
2 Dally, A M and G Second 1990 Chloroplast DNA diversity in wild and cultivated species of rice (Genus Oryza, section Oryza). Cladistic mutation and genetic-distance analysis Theor Appl. Genet. 80. 209-222
3 Eshed, Y and D Zamir 1995 An introgression line population of Lycopersicon pennelln in the cultrivated tomato enables the identi-fication and fine mapping of yield-associated QTL Genetics 141 1147-1162.
4 Jena, K. K , G S Khush, and G Kochert 1992 RFLP analysis of rice (Oryza sativa L) introgression lines Theor Appl Genet 84 608-616
5 Kang, K H, K. H. Kim, H P. Moon, S N. Ahn, I. S Choi, E G. Jeong, and H C Choi 2002b Production of F1 and backcross rogemes from wide cross of Oryza sativa x O minuta in rice Korean J Breed 34(2) 116-122
6 Li, Z and Y Zhu 1988 Rice male sterile cytoplasm and fertility restoration, pp. 85-102, in Hybrid RIce. Int'l Rice Res Inst Manila, Phihppines
7 Temnykh, S , S Cartinhour, W D Park, N Ayres, N. Hauk, L. Lipov-ich, Y G. Cho, and S R. McCouch 2000 Mapping and genome orgarnization of microsatellite sequences in rice (Oryza sativa L.) Theor Appl Genet 100' 697-712   DOI   ScienceOn
8 Khush, G S, K C Ling, R C Aquino, and V. M. Aguiero. 1977 Breeding for resistance to grassy stunt in rice Proc of the 3rd Int'I Congress of SABRAO Plant Breedmg Paper 1(4b) 3-9
9 McCouch, S R, L. Teyetlman, Y Xu, K B Lobos, K Clare, M Walton, B Fu, R Maghirang, Z. Li, Y Xing, Q. Zhang, I Kono, M Yano, R Fjellstrom, G. DeClerck, D Scheider, S Cartinhour, D Ware, and L Stein 2002 Development and mapping of 2240 new SSR markers for rice (Oryza sativa L) DNA Res. 9: 199-207   DOI   ScienceOn
10 Kang, K H, K H Kim, S N Ahn, I S Choi, E. G. Jeong, O Y Jeong, and H G Hwang 2002a Production and evaluation of agronomic characters of introgression lines from the cross of Hwaseongbyeo $^{\circ}\phi$ O. minuta in rice Korean J Breed 34(2). 123-129
11 Cho, Y. G, T. Ishn, S Temnykh, X Chen, L Lipovich, S R McCouch, W D Park, N Ayres, and S Cartinhour 2000 DIver-sity of microsatellite derived from genomic libraries and GenBank sequences in rice (Oryza sativa L) Theor Appl Genet 100 713-722   DOI   ScienceOn
12 Harlan, J R 1992 Crops and man American Society of Agronomy, Madison, Wisconsin
13 Ahn, S N, S J Kwon.J, P Suh,K H. Kang, H j. Kim, M T Song, H. G. Hwang, and H P Moon. 2001. Identification of introgres-sions in a backcross progeny derived from the cross between Oryza sativa x O grandiglumis Korean Breed J 33' 318-323
14 Young, N D and S D. Tanksley 1989 RFLP analysis of the size of chromosomal segments retained around the Tm-2 locus of tomato during backcross breeding Theor. Appl Genet 77.353-359.   DOI   ScienceOn
15 Aggarwal, R K., D S Brar, and G C. Khush 1997 Two new genomes in the Oryza complex Identified on the basis of molecular divergence analysisusing total genomic DNA hybndization Mol Gen Genet 254 1-12.   DOI   ScienceOn
16 Kubo, T, K Nakamura, and A Yoshimura 1999 Development of a series of mdica chromosome substitution lines in japonica back-round of rice Genet Newslet 16. 104-106
17 Vaughan, D. A, H Monshima, and K Kadowaki 2003 Diversity in the Oryza genus. Curr Opinion Plant Biology 6 139-146   DOI   ScienceOn
18 Xiao, J., J Li, S. Grandillo, S Ahn, L. Yuan, S D Tanksley, and S R McCouch 1998 Identification of trait-improving QTL alleles from a Wild rice relative, Oryza rufipogon. Genetics 150 899-909
19 Choi, H C, Y G Kim, H C Hong, H. G Hwang, S N Ahn, H P Moon, S S Hahn, and J D Ryu 2000 Development of blast-resistant multilines and Its blast infection and yield performance in rice, Treatises of Crop Researches 1 9-18 National Crop Exp Station, RDA, Suwon, Korea
20 Causse, M A, T M Fulton, Y G Cho,S N Ahn, J Chunwongse, K S Wu,J H Xiao,Z H Yu, P C Ronald, S E Harrington, G Sec-ond, S R. McCouch, and S D.Tanksley 1994 Saturated molecu-lar map of the rice genome based on an Interspecific backcross population Genetics 138.1251-1274
21 Aggarwal, R K., D S Brar, S Nandi, N Huang, and G C Khush 1999 Phylogenetic relationships among Oryza species revealed by AFLP markers Theor Appl Genet 98. 1320-1328   DOI   ScienceOn
22 Furbeck, S M 1993 The development and evaluation of molecular marker derived near isogenic lines to study quantitative traits in maize Ph D thesis, North Carolina State University, Raleigh
23 Choi, H C, Y G Kim, H C Hong, H. G Hwang, S N Ahn, H P Moon, S S Hahn, and J D Ryu 2000 Development of blast-resistant multilines and Its blast infection and yield performance in rice, Treatises of Crop Researches 1 9-18 National Crop Exp Station, RDA, Suwon, Korea
24 Yano, M, Y Katayose, M Ashikari, U Yamanouchi, L Monna, T Fuse, T Baba, K Yamamoto, Y Umehara, and T Sasaki 2000 Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CON-STANS. Plant Cell 12.2473-2484   DOI   ScienceOn
25 Panaud, O , X Chen, and S R McCouch. 1996. Development of mic-rosatellite markers and characterization of simple sequence length polymorphism in rice (Oryza sativa L) Mol. Gen Genet. 252 597-607
26 Wang, Z. Y, G Second, and S D Tanksley 1992 Polymorphism and phylogenetic relationships among species in the genus Oryzae as determined by analysis of nuclear RFLPs Theor Appl Genet 83. 565-581
27 Temnykh, S., G DeClerck, A. Lukashova, L. Lipovich, S Cantinhour, and S R McCouch 2001 Computational and Experimental Anal-ysis of Microsatellites in Rice (Oryza sativa L). Frequency, Length Variation, Transposon Associations, and Genetic Marker Potential Genome Res 11: 1441-1452