Browse > Article
http://dx.doi.org/10.4313/JKEM.2007.20.1.080

Optical Characterization of Sensory Rhodopsin II Thin Films using a Near-field Scanning Microwave Microscope  

Yu, Kyung-Son (서강대학교 물리학과 바이오융합협동과정)
Kim, Song-Hui (서강대학교 물리학과 바이오융합협동과정)
Yoon, Young-Woon (서강대학교 물리학과 바이오융합협동과정)
Lee, Kie-Jin (서강대학교 물리학과 바이오융합협동과정)
Lee, Jung-Ha (서강대학교 생명과학과 바이오융합협동과정)
Choi, Ah-Reum (서강대학교 생명과학과 바이오융합협동과정)
Jung, Kwang-Hwan (서강대학교 생명과학과 바이오융합협동과정)
Publication Information
Journal of the Korean Institute of Electrical and Electronic Material Engineers / v.20, no.1, 2007 , pp. 80-85 More about this Journal
Abstract
We report the electro-optical properties of the sensory rhodopsin II using a near-field scanning microwave microscope(NSMM). Rhodopsin was known as a photoreceptor pigment with a retinal as a chromophore via a protonated Schiff base and consists of seven ${\alpha}-helical$ transmembrane segments. The sensory rhodopsin II, expressing E. coli UT5600 with endogenous retinal biosynthesis system and purified with $Ni^{-2}-NTA$ affinity chromatography in the presence of 0.02 % DM (Dodecyl Maltoside) from Natronomonas pharaonis. We measured the absorption spectra and the transients difference of sensory rhodopsin II from Natronomonas pharaonis using a UV/VIS spectrophotometer with Nd-Yag Laser (532 nm). The absorption spectra of NpSR II showed a typical rhodopsin spectrum with a left shoulder region and the photointermediates spectra of NpSR II-ground state (${\lambda}max=498\;nm$), NpSR II-M state (${\lambda}max=390\;nm$), and NpSR II-O state (${\lambda}max=550\;nm$) during the photocycle. The observed photocycle reaction was confirmed by measuring the microwave reflection coefficient $S_{11}$ at an operating frequency of f=3.93-3.95 GHz and compared with the results of a photocycle of NpSR II.
Keywords
Sensory rhodopsin II; NSMM; Near-field scanning microwave microscope; Natronomonas pharaonis; NpSR II; Reflection coefficient; $S_{11}$;
Citations & Related Records
연도 인용수 순위
  • Reference
1 J. Kim, S. Kim, H. Yoo, J. Yang, H. Yoo, K. Yu, S. Kim, and K. Lee, 'The study of near-field scanning microwave microscope for the nondestructive detection system', Journal of the Korean Society for Nondestructive Testing, Vol. 24, No.5, 2004
2 K. Karrai and R. D. Grober, 'Piezoelectric tip-sample distance control for near field optical microscopes', Appl. Phys, Lett., Vol. 66, p. 1842, 1995   DOI   ScienceOn
3 J. Sasaki and J. L. Spudich, 'Proton transport by sensory rhodopsins and its modulation by transducer-binding', Biochim. Biophys. Acta, Vol. 1460, p. 230, 2000   DOI   ScienceOn
4 C. H. Sikorsi and U. Merkt, 'Spectroscopy of electronic states in InSb quantum dots', Phys. Rev Lett., Vol. 62, p. 2164, 1989   DOI   ScienceOn
5 C. Gao and X.-D. Xiang, 'Quantitative microwave near-field microscopy of dielectric properties', Rev. Sci. Instrum., Vol. 69 p. 3846, 1998   DOI
6 E. Hecht, 'Optics', Addison-Wesley, 1987
7 J. Kim, M. Kim, H. Kim, D. Song, K. Lee, and B. Friedman, 'The study of near-field scanning microwave microscope for the nondestructive detection system', Appl. Phys. Letts., Vol. 83, p. 1026, 2003   DOI   ScienceOn
8 D. Kajfez and P. Guillon, 'Dielectric resonators', Noble publishing Co., Atlanta, 1998
9 Gabriel M. Rebeiz, 'RF MEMS theory, design, and technology', Wiley-Interscience, 2003
10 J. Kim, M. Kim, H. Kim, D. Song, B. Friedman, and K. Lee, 'Improving images form a near-field scanning microwave microscope using a hybrid probe', Appl. Phys. Lett., Vol. 83, p. 1026, 2003   DOI   ScienceOn
11 H. Goldstein 'Classical mechanics', Addision-Wesley, 1986
12 S. Kim, H. Yoo, K. Lee, and B. Friedman, 'Distance control for a near-field scanning microwave microscope in liquid using a quartz tuning fork', Appl. Phys. Letts., Vol. 86, p. 153506, 2005   DOI   ScienceOn
13 M. Koopman, B. I. de Bakker, M. F. Garcia-Parajo, and N. F. van Hulst, 'Shear force imaging of soft samples in liquid using a diving bell concept', Appl. Phys. Lett., Vol. 83, No. 24, p. 5083, 2003   DOI   ScienceOn
14 W. H. J. Rensen, N. F. van Hulst, and S. B. Kmmer, 'Imaging soft samples in liquid with tuning fork based shear force microscopy', Appl. Phys. Lett., Vol. 77, p. 1557, 2000   DOI
15 http://www.citizen.co.jp/english/crystal/index.html
16 E. R. S. Kunji, E. N. Spudich, R. Grisshammer, R. Henderson, and J. L. Spudich, 'Electron crystallographic analysis of two-dimensional crystals of sensory rhodopsin II: A 6.9 A projection structure', J. Mol. BioI., Vol. 308, p. 279, 2001   DOI   ScienceOn
17 J. L. Spudich, C. S. Yang, K. H. lung, and E. N. Spudich, 'Retinylidene proteins: Structures and functions from Archaea to humans', Annu. Rev. Cell Dev. BioI., Vol. 16, p. 365, 2002
18 J. L. Spudich and K. H. Jung, 'Microbial rhodopsins: Phylogenetic and functional diversity', eds Briggs, WR and Spudich JL, Handbook of Photosensory Receptors. Wiley-VCH Press, Weinheim, Germany, p. 1, 2005