Establishing Effective Screening Methodology for Novel Herbicide Substances from Metagenome
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Lee, Boyoung
(Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology)
Choi, Ji Eun (Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology) Kim, Young Sook (Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology) Song, Jae Kwang (Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology) Ko, Young Kwan (Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology) Choi, Jung Sup (Eco-friendly and New materials Research Center, Korea Research Institute of Chemical Technology) |
1 | Allen, M.B. 1952. The cultivation of Myxophyceae. Arch. Microbiol. 17:34-53. |
2 | Bayer, E., Gugel, K., Hägele, K., Hagenmaier, H., Jessipow, S., et al. 2004. Stoffwechselprodukte von mikroorganismen. 98. Mitteilung. Phosphinothricin und Phosphinothricyl-Alanyl- Alanin. Helv. Chim. Acta. 55:224-239. |
3 | Bender, C.L., Alarcon-Chaidez, F. and Gross, D.C. 1999. Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases. Microbiol. Mol. Biol. Rev. 63:266-92. |
4 | Courtois, S., Cappellano, C.M., Ball, M., Francou, F.X., Normand, P., et al. 2003. Recombinant environmental libraries provide access to microbial diversity for drug discovery from natural products. Appl. Environ. Microbiol. 69:49-55. DOI |
5 | Daniel, R. 2004. The soil metagenome--a rich resource for the discovery of novel natural products. Curr. Opin. Biotechnol. 15:199-204. DOI |
6 | Duke, S., Abbas, H., Amagasa, T. and Tanaka, T. 1996. Phytotoxins of microbial origin with potential for use as herbicides. Critical Reports on Applied Chemistry 35:82-112. |
7 | Fairchild, J.F., Ruessler, D.S. and Carlson, A.R. 1998. Comparative sensitivity of five species of macrophytes and six species of algae to atrazine, metribuzin, alachlor, and metolachlor. Environ. Toxicol. Chem. 17:1830-1834. DOI |
8 | Gillespie, D.E., Brady, S.F., Bettermann, A.D., Cianciotto, N.P., Liles, M.R., et al. 2002. Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA. Appl. Environ. Microbiol. 68:4301-4306. DOI |
9 | Hahn, D.R., Graupner, P.R., Chapin, E., Gray, J., Heim, D., et al. 2009. Albucidin: a novel bleaching herbicide from streptomyces albus subsp. chlorinus NRRL B-24108. J. Antibiot. 62:191-194. DOI |
10 | Handelsman, J., Rondon, M.R., Brady, S.F., Clardy, J. and Goodman, R.M. 1998. Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chemistry & biology. 5:R245-R249. DOI |
11 | Henne, A., Schmitz, R.A., Bomeke, M., Gottschalk, G. and Daniel, R. 2000. Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on escherichia coli. Appl. Environ. Microbiol. 66:3113-3116. DOI |
12 | Kao-Kniffin, J., Carver, S.M. and DiTommaso, A. 2013. Advancing weed management strategies using metagenomic techniques. Weed Sci. 61:171-184. DOI |
13 | Hoagland, R.E. 1990. Microbes and microbial products as herbicides. An overview. ACS Symposium Series1990. 439:2-52. |
14 | Hoerlein, G. 1994. Glufosinate (phosphinothricin), a natural amino acid with unexpected herbicidal properties. Rev. Environ. Contam. Toxicol. 138:73-146. |
15 | Iqbal, H.A., Feng, Z. and Brady, S.F. 2012. Biocatalysts and small molecule products from metagenomic studies. Curr. Opin. Chem. Biol. 16:109-16. DOI |
16 | Lammle, K., Zipper, H., Breuer, M., Hauer, B., Buta, C., et al. 2007. Identification of novel enzymes with different hydrolytic activities by metagenome expression cloning. J. biotechnol. 127:575-592. DOI |
17 | Langer, M., Gabor, E.M., Liebeton, K., Meurer, G., Niehaus, F., et al. 2006. Metagenomics: An inexhaustible access to nature's diversity. Biotechnol. J. 1:815-821. DOI |
18 | Lydon, J., Duke, S.O. and Singh, B. 1999. Inhibitors of glutamine biosynthesis, Marcel Dekker: New York, NY, USA. |
19 | Ma, J., Xu, L., Wang, S., Zheng, R., Jin, S., et al. 2002. Toxicity of 40 herbicides to the green alga chlorella vulgaris. Ecotoxicol. Environ. Saf. 51:128-132. DOI |
20 | Olmstead, J.W., Lang, G.A. and Grove, G.G. 2000. A leaf disk assay for screening sweet cherry genotypes for susceptibility to powdery mildew. HortSci. 35:274-277. |
21 | Pavlic, Z., Stjepanovic, B., Horvatic, J., Persic, V., Puntaric, D., et al. 2006. Comparative sensitivity of green algae to herbicides using Erlenmeyer flask and microplate growth-inhibition assays. Bull. Environ. Contam. Toxicol. 76:883-890. DOI |
22 | Vedrine, C., Leclerc, J.C., Durrieu, C. and Tran-Minh, C. 2003. Optical whole-cell biosensor using Chlorella vulgaris designed for monitoring herbicides. Biosens Bioelectron. 18:457-463. DOI ScienceOn |
23 | Podola, B. and Melkonian, M. 2005. Selective real-time herbicide monitoring by an array chip biosensor employing diverse microalgae. Journal of Applied Phycol. 17:261-271. DOI |
24 | Simon, C. and Daniel, R. 2011. Metagenomic analyses: past and future trends. Appl. Environ. Microbiol. 77:1153-1161. DOI |
25 | Tworkoski, T. 2002. Herbicide effects of essential oils. Weed Sic. 50(4):425-431. DOI |
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