Browse > Article
http://dx.doi.org/10.5012/bkcs.2012.33.7.2156

Sample Preparation and Stability of Human Serum and Urine Based on HPLC-DAD for Metabonomics Studies  

Liu, Yun (Key Laboratory of Chemistry of Northwestern Plant Resources and Key Laboratory for Natural Medicine of Gansu Province, Chinese Academy of Sciences, Lanzhou Institute of Chemical Physics)
Sun, Xiaoming (Key Laboratory of Chemistry of Northwestern Plant Resources and Key Laboratory for Natural Medicine of Gansu Province, Chinese Academy of Sciences, Lanzhou Institute of Chemical Physics)
Di, Duolong (Key Laboratory of Chemistry of Northwestern Plant Resources and Key Laboratory for Natural Medicine of Gansu Province, Chinese Academy of Sciences, Lanzhou Institute of Chemical Physics)
Feng, Yuxiang (Gansu Province Hospital of Traditional Chinese Medicine)
Jin, Fengling (The First Affiliated Hospital of Lanzhou University)
Publication Information
Abstract
Many literatures focus on the biological relevance and the identification of biomarkers for disease activity assessment while less attention has been paid to the development of standard procedures for sample preparation and storage based on liquid chromatography technique. The influencing factors including protein precipitation, storage temperature, storage time, and reconstitution by ultra pure water were analyzed employing HPLC-DAD. The effects were investigated from five participants over three months by principal components analysis (PCA) and the values of percent changes (PC). The samples with protein precipitation might slow the rate of bacterial enzymatic conversion. After protein precipitation, the average PC of urine samples ($0.136{\pm}0.013$, n = 5) is relatively less than that of the serum samples ($0.173{\pm}0.026$, n = 5) for three months. Minimal effects on metabolic profiles of serum and urine (PC < 0.15) are reasonable for metabolomic studies after protein precipitation and storage at $-20^{\circ}C$ for two months.
Keywords
Stability; HPLC/UPLC; Serum; Urine; Metabonomics;
Citations & Related Records

Times Cited By Web Of Science : 0  (Related Records In Web of Science)
연도 인용수 순위
  • Reference
1 Dai, H.; Xiao, C. N.; Liu, H. B.; Hao, F. H.; Tang, H. R. J. Proteome Res. 2010, 9, 1565.   DOI
2 Dettmer, K.; Aronov, P. A.; Hammock, B. D. Mass Spectrom. Rev. 2007, 26, 51.   DOI   ScienceOn
3 Karakach, T. K.; Wentzell, P. D.; Walter, J. A. Anal. Chim. Acta 2009, 636, 163.   DOI
4 Dowlatabadi, R.; Weljie, A. M.; Thorpe, T. A.; Yeung, E. C.; Vogel, H. J. Plant Physiol. Bioch. 2009, 47, 343.   DOI
5 Roux, A.; Lison, D.; Junot, C.; Heilier, J. F. Clin. Biochem. 2011, 44, 119.   DOI
6 Wilson, I. D.; Plumb, R.; Granger, J.; Major, H.; Williams, R.; Lenz, E. M. J. Chromatogr. B 2005, 817, 67.   DOI   ScienceOn
7 Berkov, S.; Bastida, J.; Viladomat, F.; Codina, C. Talanta 2011, 83, 1455.   DOI
8 Spagou, K.; Theddoridis, G.; Wilson, I.; Raikos, N.; Greaves, P.; Edwards, R.; Nolan, B.; Klapa, M. I. J. Chromatogr. B 2011, 879, 1467.   DOI
9 Tuan, H. P.; Kaskavelis, L.; Daykin, C. A.; Janssen, H. G. J. Chromatogr. B 2003, 789, 283.   DOI
10 Lauridsen, M.; Hansen, S. H.; Jaroszewski, J. W.; Cornett, C. Anal. Chem. 2007, 79, 1181.   DOI
11 Want, E. J.; O'Maille, G.; Smith, C. A.; Brandon, T. R.; Uritboonthai, W.; Qin, C.; Trauger, S. A.; Siuzdak, G. Anal. Chem. 2006, 78, 743.   DOI
12 Gika, H. G.; Theodoridis, G. A.; Wilson, I. D. J. Chromatogr. A 2008, 1189, 314.   DOI
13 Cattell, W. R.; Sardeson, J. M.; Hutchinson, E.; O'grady, F. Brit. Med. J. 1969, 3, 175.
14 Peddie, B. A.; Chambers, S. T.; Lever, M. J. Lab. Clin. Med. 1996, 128, 417.   DOI
15 Stemina, M. A.; Voevodin, D. A.; Stakhanov, V. D.; Kisilevich, O. N.; Rozanova, G. N. Bull. Exp. Biol. Med. 2003, 135, 178.   DOI
16 Meleh, M.; Pozlep, B.; Mlakar, A.; Meden-Vrtovec, H.; Zupanèiè- Kralj, L. J. Chromatogr. B 2007, 858, 287.   DOI
17 Yang, J.; Xu, G. W.; Zheng, Y. F.; Kong, H. W.; Pang, T.; Lv, S.; Yang, Q. J. Chromatogr. B 2004, 813, 59.   DOI
18 Fan, X. H.; Ba, J. Q.; Shen, P. Eng. Med. Boil. 2005, 6, 6081.
19 Sabatine, M. S.; Liu, E.; Morrow, D. A.; Heller, E.; McCarroll, R.; Wiegand, R.; Berriz, G. F.; Roth, F. P.; Gerszten, R. E. Circulation 2005, 112, 3868.   DOI
20 Issaq, H. J.; Nativ, O.; Waybright, T.; Luke, B.; Veenstra, T. D.; Issaq, E. J.; Kravstov, A.; Mullerad, M. J. Urology 2008, 179, 2422.   DOI
21 Lindon, J. C.; Holmes, E.; Bollard, M. E.; Stanley, E. G.; Nicholson, J. K. Biomarkers 2004, 9, 1.   DOI   ScienceOn
22 Weckwerth, W.; Morgenthal, K. Drug Discov. Today 2005, 10, 1551.   DOI   ScienceOn
23 Coen, M.; O'Sullivan, M.; Bubb, W. A.; Kuchel, P. W.; Sorrell, T. Clin. Infect. Dis. 2005, 41, 1582.   DOI   ScienceOn
24 Burns, M. A.; He, W.; Wu, C. L.; Cheng, L. L. Technol. Cancer Res. T. 2004, 3, 591.   DOI
25 Watkins, S. M.; Reifsnyder, P. R.; Pan, H. J.; German, J. B.; Leiter, E. H. J. Lipid Res. 2002, 43,1809.   DOI
26 Stentiford, G. D.; Viant, M. R.; Ward, D. G.; Johnson, P. J.; Martin, A.; Wenbin, W.; Cooper, H. J.; Lyons, B. P.; Feist, S. W. Omics 2005, 9, 281.   DOI   ScienceOn
27 Maher, A. D.; Zirah, S. M.; Holmes, E.; Nicholson, J. K. Anal. Chem. 2007, 79, 5204.   DOI
28 Anderson, N. L.; Anderson, N. G. Mol. Cell Proteomics 2002, 1, 845.   DOI
29 Maher, A. D.; Zirah, S. M.; Holmes, E.; Nicholson, J. K. Anal. Chem. 2007, 79, 5204.   DOI
30 Saude, E. J.; Adamko, D.; Rowe, B. H.; Marrie, T.; Sykes, B. D. Metabolomics 2007, 3, 19.   DOI
31 Nicholson, J. K.; Homes E.; Lindon, J. C.; Wilson, I. D. Nat. Biotechnol. 2004, 22, 1268.   DOI   ScienceOn