Browse > Article
http://dx.doi.org/10.5012/bkcs.2012.33.10.3248

1H, 15N and 13C Backbone Assignments and Secondary Structures of C-ter100 Domain of Vibrio Extracellular Metalloprotease Derived from Vibrio vulnificus  

Yun, Ji-Hye (Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University)
Kim, Hee-Youn (Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University)
Park, Jung-Eun (Department of Biotechnology, College of Natural Sciences, Chosun University)
Cheong, Hae-Kap (Magnetic Resonance Team, Korea Basic Science Institute (KBSI))
Cheong, Chae-Joon (Magnetic Resonance Team, Korea Basic Science Institute (KBSI))
Lee, Jung-Sup (Department of Biotechnology, College of Natural Sciences, Chosun University)
Lee, Weon-Tae (Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University)
Publication Information
Abstract
Vibrio extracellular metalloprotease (vEP), secreted from Vibrio vulnificus, shows various proteolytic function such as prothrombin activation and fibrinolytic activities. Premature form of vEP has an N-terminal (nPP) and a C-terminal (C-ter100) region. The nPP and C-ter100 regions are autocleaved for the matured metalloprotease activity. It has been proposed that two regions play a key role in regulating enzymatic activity of vEP. Especially, C-ter100 has a regulatory function on proteolytic activity of vEP. C-ter100 domain has been cloned into the E. coli expression vectors, pET32a and pGEX 4T-1 with TEV protease cleavage site and purified using gel-filtration chromatography followed by affinity chromatography. To understand how C-ter100 modulates proteolytic activity of vEP, structural studies were performed by heteronuclar multi-dimensional NMR spectroscopy. Backbone $^1H$, $^{15}N$ and $^{13}C$ resonances were assigned by data from standard triple resonance and HCCH-TOCSY experiments. The secondary structures of vEP C-ter100 were determined by TALOS+ and CSI software based on hydrogen/deuterium exchange. NMR data show that C-ter100 of vEP forms a ${\beta}$-barrel structure consisting of eight ${\beta}$-strands.
Keywords
Vibrio extracellular metalloprotease (vEP); Secondary structure; NMR; Cloning; Purification;
Citations & Related Records

Times Cited By Web Of Science : 1  (Related Records In Web of Science)
연도 인용수 순위
  • Reference
1 Piotto, M.; Saudek, V.; Sklenar, V. J. Biomol. NMR 1992, 2, 661.   DOI   ScienceOn
2 Wuthrich, K. J. Biol. Chem. 1990, 265, 22059.
3 Delaglio, F.; Grzesiek, S.; Vuister, G. W.; Zhu, G.; Pfeifer, J.; Bax, A. J. Biomol. NMR 1995, 6, 277.
4 Lee, W.; Westler, W. M.; Bahrami, A.; Eghbalnia, H. R.; Markley, J. L. Bioinformatics 2009, 25, 2085.   DOI   ScienceOn
5 Wuthrich, K. NMR of Proteins and Nucleic Acids, Wiley: New York, 1986.
6 Wishart, D. S.; Sykes, B. D.; Richrds, F. M. Biochemistry 1992, 31, 1647.   DOI   ScienceOn
7 Finucane, M. D.; Jardetzky, O. Protein Sci. 1996, 5, 653.
8 Tapper, H.; Herwald, H. Blood 2000, 96, 2329.
9 Chiang, S. R.; Chuang, Y. C. J. Microbiol. Immunol. Infect. 2003, 36, 81.
10 Janda, J. M.; Powers, C.; Bryant, R. G.; Abbott, S. L. Clin. Microbiol. Rev. 1988, 1, 245.
11 Ulusarac, O.; Carter, E. South. Med. J. 2004, 97, 163.   DOI   ScienceOn
12 Chang, A. K.; Kim, H. Y.; Park, J. E.; Acharya, P.; Park, I. S.; Yoon, S. M.; You, H. J.; Hahm, K. S.; Park, J. K.; Lee, J. S. J. Bacteriol. 2005, 187, 6909.   DOI   ScienceOn
13 Chang, A. K.; Park, J. W.; Lee, E. H.; Lee, J. S. J. Bacteriol. 2007, 189, 6832.   DOI   ScienceOn
14 Garcia-Touchard, A.; Henry, T. D.; Sangiorgi, G.; Spagnoli, L. G.; Mauriello, A.; Conover, C.; Schwartz, R. S. Arterioscler Thromb. Vasc. Biol. 2005, 25, 1119.   DOI   ScienceOn
15 Chang, A. K.; Park, J. W.; Lee, E. H.; Lee, J. S. J. Bacteriol. 2007, 189, 6832.   DOI   ScienceOn
16 Miyoshi, S.; Wakae, H.; Tomochika, K.; Shinoda, S. J. Bacteriol. 1997, 179, 7606.
17 Shen, Y.; Delaglio, F.; Cornilescu, G.; Bax, A. J. Biomol. NMR 2009, 44, 213.   DOI   ScienceOn
18 Cai, M. L.; Huang, Y.; Sakaguchi, K.; Clore, G. M.; Gronenborn, A. M.; Craigie, R. J. Biomol. NMR 1998, 11, 97.   DOI   ScienceOn
19 Wishart, D.S.; Sykes, B. D. J. Biomol. NMR 1994, 4, 171.