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http://dx.doi.org/10.5012/bkcs.2010.31.11.3195

Dynamics of C60 Molecules in Biological Membranes: Computer Simulation Studies  

Chang, Rak-Woo (Department of Chemistry, Kwangwoon University)
Lee, Ju-Min (Department of Chemistry, Kwangwoon University)
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Abstract
We have performed molecular dynamics simulations of atomistic models of $C_{60}$ molecules and DMPC bilayer membranes to study the static and dynamic effects of carbon nanoparticles on biological membranes. All four $C_{60}$-membrane systems were investigated representing dilute and concentrated solutions of $C_{60}$ residing either inside or outside the membrane. The concentrated $C_{60}$ molecules in water phase start forming an aggregated cluster. Due to its heavy mass, the cluster tends to adhere on the surface of the bilayer membrane, hindering both translational and rotational diffusion of individual $C_{60}$. On the other hand, once $C_{60}$ molecules accumulate inside the membrane, they are well dispersed in the central region of the bilayer membrane. Because of the homogeneous dispersion of $C_{60}$ inside the membrane, each leaflet is pushed away from the center, making the bilayer membrane thicker. This thickening of the membrane provides more room for both translational and rotational motions of $C_{60}$ inside the membrane compared to that in the water region. As a result, the dynamics of $C_{60}$ inside the membrane becomes faster with increasing its concentration.
Keywords
Fullerene; Carbon nanoparticle; DMPC membrane; Molecular dynamics simulation;
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1 Torrie, G. M.; Valleau, J. P. J. Comput. Phys. 1977, 23, 187.   DOI   ScienceOn
2 Roux, B. Comput. Phys. Commun. 1995, 91, 275.   DOI   ScienceOn
3 Johnson, R. D.; Yannoni, C. S.; Dorn, H. C.; Salem, J. R.; Bethune, D. S. Science 1992, 255, 1235.   DOI   ScienceOn
4 Johnson, R. D.; Bethune, D. S.; Yannoni, C. S. Acc. Chem. Res. 1992, 25, 169.   DOI
5 Li, L.; Bedrov, D.; Smith, G. D. J. Phys. Chem. B 2006, 110, 10509.   DOI   ScienceOn
6 Friedman, S. H.; Ganapathi, P. S.; Rubin, Y.; Kenyon, G. L. J. Med. Chem. 1998, 41, 2424.   DOI   ScienceOn
7 Yeh, I. C.; Hummer, G. Proc. Natl. Acad. Sci. USA 2004, 101, 12177.   DOI   ScienceOn
8 Qiao, R.; Roberts, A. P.; Mount, A. S.; Klaine, S. J.; Ke, P. C. Nano Lett. 2007, 7, 614.   DOI   ScienceOn
9 Li, L.; Davande, H.; Bedrov, D.; Smith, G. D. J. Phys. Chem. B 2007, 111, 4067.   DOI   ScienceOn
10 Bedrov, D.; Smith, G. D.; Davande, H.; Li, L. J. Phys. Chem. B 2008, 112, 2078.   DOI   ScienceOn
11 Chang, R.; Violi, A. J. Phys. Chem. B 2006, 110, 5073.   DOI   ScienceOn
12 Mayo, S. L.; Olafson, B. D.; Goddard, W. A., III. J. Phys. Chem. 1990, 94, 8897.   DOI
13 Choe, S.; Chang, R.; Jeon, J.; Violi, A. Biophys. J. 2008, 95, 4102.   DOI   ScienceOn
14 Wong-Ekkabut, J.; Baoukina, S.; Triampo, W.; Tang, I.-M.; Tieleman, D. P.; Monticelli, L. Nature Nanotech. 2008, 3, 363.   DOI   ScienceOn
15 Smith, W.; Forester, T. R. J. Molec. Graphics 1996, 14, 136.   DOI   ScienceOn
16 Ryckaert, J. P.; Ciccotti, G.; Berendsen, H. J. C. J. Comput. Phys. 1977, 23, 327.   DOI   ScienceOn
17 Smondyrev, A. M.; Berkowitz, M. L. J. Comput. Chem. 1999, 20, 531.   DOI   ScienceOn
18 Chang, R. W.; Ayton, G. S.; Voth, G. A. J. Chem. Phys. 2005, 122, 244716.   DOI   ScienceOn
19 Smondyrev, A. M.; Berkowitz, M. L. J. Chem. Phys. 1999, 110, 3981.   DOI   ScienceOn
20 Smondyrev, A. M.; Voth, G. A. Biophys. J. 2002, 82, 1460.   DOI   ScienceOn
21 Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. J. Chem. Phys. 1983, 79, 926.   DOI
22 Adelmann, P.; Baierl, T.; Drosselmeyer, E.; Politis, G.; Seidel, A.; Schwegler-Berry, D.; Steinleitner, G., Effects of Fullerenes on Alveolar Macrophages In Vitro; ILSI Press: Washington, DC, 1994.
23 Saiz, L.; Bandyopadhyay, S.; Klein, M. L. Biosci. Rep. 2002, 22, 151.   DOI   ScienceOn
24 Redondo, A.; LeSar, R. Ann. Rev. Mater. Res. 2004, 34, 279.   DOI   ScienceOn
25 Voth, G. A. Front. Biosci. 2003, 8, S1384.   DOI
26 Florian, J.; Goodman, M. F.; Warshel, A. Proc. Natl. Acad. Sci. USA 2005, 102, 6819.   DOI   ScienceOn
27 Schlick, T.; Barth, E.; Mandziuk, M. Annu. Rev. Biophys. Biomolec. Struct. 1997, 26, 181.   DOI   ScienceOn
28 Kohl, P.; Noble, D.; Winslow, R. L.; Hunter, P. J. Philos. Trans. R. Soc. Lond. Ser. A-Math. Phys. Eng. Sci. 2000, 358, 579.   DOI   ScienceOn
29 Moraitakis, G.; Purkiss, A. G.; Goodfellow, J. M. Rep. Prog. Phys. 2003, 66, 383.   DOI   ScienceOn
30 Warshel, A. Proc. Natl. Acad. Sci. USA 2005, 102, 1813.   DOI   ScienceOn
31 Zhu, Z. W.; Schuster, D. I.; Tuckerman, M. E. Biochemistry 2003,42, 1326.   DOI   ScienceOn
32 Xie, Y. H.; Soh, A. K. Mater. Lett. 2005, 59, 971.   DOI   ScienceOn
33 Gao, H. J.; Kong, Y. Annual Review Of Materials Research 2004, 34, 123.   DOI   ScienceOn
34 Noon, W. H.; Kong, Y. F.; Ma, J. P. Proc. Natl. Acad. Sci. USA 2002, 99, 6466.   DOI   ScienceOn
35 Srinivas, G.; Klein, M. L. Nanotechnology 2004, 15, 1289.   DOI   ScienceOn
36 Friedman, S. H.; DeCamp, D. L.; Sijbesma, R. P.; Srdanov, G.; Wudl, F.; Kenyon, G. L. J. Am. Chem. Soc. 1993, 115, 6506.   DOI   ScienceOn
37 Degiorgi, L. Adv. Phys. 1998, 47, 207.   DOI   ScienceOn
38 Prato, M. J. Mater. Chem. 1997, 7, 1097.   DOI   ScienceOn
39 Ball, P. Nature 2001, 414, 142.   DOI   ScienceOn
40 Endo, M.; Hayashi, T.; Kim, Y. A.; Terrones, M.; Dresselhaus, M. S. Philos. Trans. R. Soc. Lond. Ser. A-Math. Phys. Eng. Sci. 2004, 362, 2223.   DOI   ScienceOn
41 Colvin, V. L. Nat. Biotechnol. 2003, 21, 1166.   DOI   ScienceOn
42 Sayes, C. M.; Fortner, J. D.; Guo, W.; Lyon, D.; Boyd, A. M.; Ausman, K. D.; Tao, Y. J.; Sitharaman, B.; Wilson, L. J.; Hughes, J. B.; West, J. L.; Colvin, V. L. Nano Lett. 2004, 4, 1881.   DOI   ScienceOn
43 Warheit, D. B.; Laurence, B. R.; Reed, K. L.; Roach, D. H.; Reynolds, G. A. M.; Webb, T. R. Toxicol. Sci. 2004, 77, 117.   DOI   ScienceOn
44 Lam, C. W.; James, J. T.; McCluskey, R.; Hunter, R. L. Toxicol. Sci. 2004, 77, 126.
45 Shvedova, A. A.; Castranova, V.; Kisin, E. R.; Schwegler-Berry, D.; Murray, A. R.; Gandelsman, V. Z.; Maynard, A.; Baron, P. J. Toxicol. Env. Health Pt A 2003, 66, 1909.   DOI   ScienceOn
46 Huczko, A.; Lange, H.; Calko, E.; Grubek-Jaworska, H.; Droszcz, P. Fullerene Sci. Technol. 2001, 9, 251.   DOI   ScienceOn
47 Huczko, A.; Lange, H.; Calko, E. Fullerene Sci. Technol. 1999, 7, 935.   DOI   ScienceOn
48 Maynard, A. D.; Baron, P. A.; Foley, M.; Shvedova, A. A.; Kisin, E. R.; Castranova, V. J. Toxicol. Env. Health Pt A 2004, 67, 87.   DOI   ScienceOn
49 Arnall, A. H. Future Technologies, Today's Choices; Greenpeace Environmental Trust: London, 2003.
50 Merlo, D. F.; Garattini, S.; Gelatti, U.; Simonati, C.; Covolo, L.; Ceppi, M.; Donato, F. Occup. Environ. Med. 2004, 61.
51 Uragoda, C. G. Occup. Med.-Oxf. 1997, 47, 269.   DOI   ScienceOn
52 Lin, Y.; Taylor, S.; Li, H. P.; Fernando, K. A. S.; Qu, L. W.; Wang, W.; Gu, L. R.; Zhou, B.; Sun, Y. P. J. Mater. Chem. 2004, 14, 527.   DOI   ScienceOn
53 Ajayan, P. M.; Charlier, J. C.; Rinzler, A. G. Proc. Natl. Acad. Sci. USA 1999, 96, 14199.   DOI
54 de Jonge, N.; Bonard, J. M. Philos. Trans. R. Soc. Lond. Ser. A-Math. Phys. Eng. Sci. 2004, 362, 2239.   DOI   ScienceOn
55 Dresselhaus, M. S.; Dai, H. MRS Bull. 2004, 29, 237.   DOI
56 Bosi, S.; Da Ros, T.; Spalluto, G.; Prato, M. Eur. J. Med. Chem. 2003, 38, 913.   DOI   ScienceOn
57 Prato, M. Fullerene materials. In Fullerenes And Related Structures; Springer-Verlag: Berlin, Germany, 1999; Vol. 199, p 173.
58 Subramoney, S. Adv. Mater. 1998, 10, 1157.   DOI   ScienceOn