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http://dx.doi.org/10.5012/bkcs.2007.28.3.386

MP2 Basis Set Limit Binding Energy Estimates of Hydrogen-bonded Complexes from Extrapolation-oriented Basis Sets  

Park, Young-Choon (Division of Natural Sciences, College of Natural Sciences, Ajou University)
Lee, Jae-Shin (Division of Natural Sciences, College of Natural Sciences, Ajou University)
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Abstract
By use of a simple two-point extrapolation scheme estimating the correlation energies of the molecules along with the basis sets specifically targeted for extrapolation, we have shown that the MP2 basis set limit binding energies of large hydrogen-bonded complexes can be accurately predicted with relatively small amount of computational cost. The basis sets employed for computation and extrapolation consist of the smallest correlation consistent basis set cc-pVDZ and another basis set made of the cc-pVDZ set plus highest angular momentum polarization functions from the cc-pVTZ set, both of which were then augmented by diffuse functions centered on the heavy atoms except hydrogen in the complex. The correlation energy extrapolation formula takes the (X+1)-3 form with X corresponding to 2.0 for the cc-pVDZ set and 2.3 for the other basis set. The estimated MP2 basis set limit binding energies for water hexamer, hydrogen fluoride pentamer, alaninewater, phenol-water, and guanine-cytosine base pair complexes of nucleic acid by this method are 45.2(45.9), 36.1(37.5), 10.9(10.7), 7.1(6.9), and 27.6(27.7) kcal/mol, respectively, with the values in parentheses representing the reference basis set limit values. A comparison with the DFT results by B3LYP method clearly manifests the effectiveness and accuracy of this method in the study of large hydrogen-bonded complexes.
Keywords
Hydrogen bonding; MP2 basis set limit; Extrapolation;
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1 Laasonen, K.; Sprik, M.; Parrinello, M.; Car, R. J. Chem. Phys. 1993, 99, 9080   DOI   ScienceOn
2 Laasonen, K.; Parrinello, M.; Car, R.; Lee, C.; Vanderbilt, D. Chem. Phys. Lett. 1993, 207, 208   DOI   ScienceOn
3 Scott, A. P.; Radom, L. J. Phys. Chem. 1996, 100, 16502   DOI   ScienceOn
4 Stephens, J.; Devlin, F. J.; Chablowski, C. F.; Frisch, M. J. Phys. Chem. 1994, 98, 11623   DOI   ScienceOn
5 Varandas, A. J. C. J. Chem. Phys. 2000, 113, 8880   DOI   ScienceOn
6 Moller, C.; Plesset, M. S. Phys. Rev. 1934, 46, 618   DOI
7 Head-Gordon, M.; Pople, J. A.; Frisch, M. J. Chem. Phys. Lett. 1988, 155, 503
8 Park, S. Y.; Lee, J. S. J. Chem. Phys. 2002, 116, 5389   DOI   ScienceOn
9 Tsuzuki, S.; Luthi, H. P. J. Chem. Phys. 2001, 114, 3949   DOI   ScienceOn
10 Boese, A. D.; Chandra, A.; Martin, J. M. L.; Marx, D. J. Chem. Phys. 2003, 119, 5965   DOI   ScienceOn
11 Zhao, Y.; Truhlar, D. G. J. Phys. Chem. A 2005, 109, 6624   DOI   ScienceOn
12 Richardson, N. A.; Wesolowski, S. S.; Schaefer, H. F. J. Am. Chem. Soc. 2002, 124, 10163   DOI   ScienceOn
13 Wilson, A.; Woon, D. E.; Peterson, K. A.; Dunnng Jr., T. H. J. Chem. Phys. 1999, 110, 7667   DOI   ScienceOn
14 Xantheas, S. S.; Burnham, C. J.; Harrison, R. J. J. Chem. Phys. 2002, 116, 1493   DOI   ScienceOn
15 Klopper, W.; Quack, M.; Suhm, M. A. Mol. Phys. 1998, 94, 105
16 Boys, S. F.; Bernardi, F. Mol. Phys. 1970, 19, 553   DOI   ScienceOn
17 Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Zakrzewski, V. G.; Montgomery, J. A. Jr.; Stratmann, R. E.; Burant, J. C.; Dapprich, S.; Millam, J. M.; Daniels, A. D.; Kudin, K. N.; Strain, M. C.; Farkas, O.; Tomasi, J.; Barone, V.; Cossi, M.; Cammi, R.; Mennucci, B.; Pomelli, C.; Adamo, C.; Clifford, S.; Ochterski, J.; Petersson, G. A.; Ayala, P. Y.; Cui, Q.; Morokuma, K.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Cioslowski, J.; Ortiz, J. V.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Gomperts, R.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Gonzalez, C.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Andres, J. L.; Gonzalez, C.; Head-Gordon, M. Gaussian 98; Gaussian Inc.: Pittsburgh, PA, 1998
18 Feller, D. J. Chem. Phys. 1992, 96, 6104   DOI
19 Jurecka, P.; Hobza, P. J. Am. Chem. Soc. 2003, 125, 15608   DOI   ScienceOn
20 Truhlar, D. G. Chem. Phys. Lett. 1998, 294, 45   DOI   ScienceOn
21 Gdanitz, R. J. J. Chem. Phys. 2000, 113, 5145   DOI   ScienceOn
22 Huh, S. B.; Lee, J. S. J. Chem. Phys. 2003, 118, 3035   DOI   ScienceOn
23 Lee, J. S. Theo. Chem. Acc. 2005, 113, 87   DOI   ScienceOn
24 Dunning, T. H., Jr. J. Chem. Phys. 1989, 90, 1007   DOI
25 Woon, D. E.; Dunnng Jr., T. H. J. Chem. Phys. 1993, 98, 1358   DOI
26 Wilson, A.; Dunning, Jr., T. H. J. Chem. Phys. 1997, 106, 8718   DOI   ScienceOn
27 Woon, D. E.; Dunnng Jr., T. H. J. Chem. Phys. 1994, 100, 2975   DOI   ScienceOn
28 Peterson, K. A.; Woon, D. E.; Dunnng Jr., T. H. J. Chem. Phys. 1994, 100, 7410   DOI   ScienceOn
29 Shavitt, I. In Molecular Interactions; Scheiner, S., Ed.; John Wiley: Chichester, 1997
30 Helgaker, T.; Klopper, W.; Koch, H.; Noga, J. J. Chem. Phys. 1997, 106, 9639   DOI   ScienceOn
31 Hwang, R.; Park, Y. C.; Lee, J. S. Theo. Chem. Acc. 2006, 115, 54   DOI   ScienceOn
32 Lee, C.; Yang, W.; Parr, R. G. Phys. Rev. B 1988, 37, 785   DOI   ScienceOn
33 Becke, A. D. J. Chem. Phys. 1992, 97, 9173   DOI
34 Becke, A. D. J. Chem. Phys. 1993, 98, 5648   DOI   ScienceOn
35 Wilson, A.; Mourik, T.; Dunning Jr., T. H. J. Mol. Struct. (THEOCHEM) 1997, 388, 339
36 Frisch, M. J.; Head-Gordon, M.; Pople, J. A. Chem. Phys. Lett. 1990, 166, 281
37 Laasonen, K.; Csajka, F.; Parrinello, M. Chem. Phys. Lett. 1992, 194, 172   DOI   ScienceOn
38 Sim, F.; St.-Amant, A.; Papai, I.; Salahub, D. R. J. Am. Chem. Soc. 1992, 114, 4391