Protein-Protein Interaction Prediction using Interaction Significance Matrix
![]() |
Jang, Woo-Hyuk
(KAIST 정보통신공학과)
Jung, Suk-Hoon (KAIST 정보통신공학과) Jung, Hwie-Sung (KAIST 정보통신공학과) Hyun, Bo-Ra (KAIST 정보통신공학과) Han, Dong-Soo (KAIST 전산학과) |
1 | Deng, M., Mehta, S., Sun, F., Chen, T., 'Inferring domain-domain interactions from protein-protein interactions,' Genome Res., 12, pp.1540-1548, 2002 DOI ScienceOn |
2 | Riley, R., Lee, C., Sabatti, C., Eisenberg, D., 'Inferring protein domain interactions from databases of interacting proteins,' Genome Biology, 6,R89, 2005 DOI PUBMED |
3 | Moza, B., Buonpane, R., Zhu, P., Herfst, C., Rahman, A., McCormick, J., Kranz, D., Sundberg, E., 'Long-range cooperative binding effects in a T cell receptor variable domain,' Proc Natl Acad Sci, 103, pp.9867-9872, 2006 DOI ScienceOn |
4 | J. Brodie and I. J. McEwan, 'Intra-domain communication between the nterminal and DNAbinding domains of the androgen receptor: modulation of androgen response element DNA binding,' Journal of Molecular Endocrinology, 34, pp.603-615, 2005 DOI ScienceOn |
5 | S.H. Jung, H.Y. Hur, D. Kim, D.S. Han, 'Identification of Conserved Domain Combinations in S. cerevisiae Proteins,' Bioinformatics and Bioengineering, pp.14-20, 2007 |
6 | Sprinzak, E., Margalit, H., 'Correlated sequencesignatures as markers of protein-protein interaction,' J. Mol. Biol., 311, pp.681-692, 2001 DOI ScienceOn |
7 | R.S. Wang, Y. Wang, L.Y. Wu, X.S. Zhang, L. Chen, 'Analysis on multi-domain cooperation for predicting protein-protein interactions,' BMC Bioinformatics, 8, pp.2-20, 2007 DOI PUBMED |
8 | Dohkan, S., Koike, A., Takagi, T., 'Support vector machines for predicting protein-protein interactions,' Genome Inform, 14, pp.502-503, 2003 |
9 | N. B. E. Ronne and K. Dano, 'Domain interplay in the urokinase receptor,' J. Biol. Chem., 217(37), 22, pp.885-22 894, 1996 DOI ScienceOn |
10 | Liu, Y., Liu, N., Zhao, H., 'Inferring proteinprotein interactions through high-throughput interaction data from diverse organisms,' Bioinformatics, 21, pp.3279-3285, 2005 DOI ScienceOn |
11 | Han, D., Kim, H., Jang, W., Lee, S., Jung, S., 'PreSPI: a domain combination based prediction system for protein-protein interaction,' Nucl Acids Res, 32, pp.6312-6320, 2004 DOI ScienceOn |
12 | Chen, L., Wu, L., Y. W., Zhang, X., 'Inferring protein interactions from experimental data by association probabilistic method,' Proteins, 62, pp.833-837, 2006 DOI ScienceOn |
13 | Marcotte, E., Pellegrini, M., Ng, H., Rice, D., Yeates, T., Eisenberg, D., 'Detecting protein function and protein-protein interactions from genome sequences,' Science, 285, pp.751-753, 1999 PUBMED |
14 | Szilagyi A, Grimm V, Arakaki A, Skolnick J, 'Prediction of physical protein-protein interactions,' Phys Biol., 2, S1-S16, 2005 DOI ScienceOn |
![]() |