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http://dx.doi.org/10.3745/KIPSTD.2005.12D.4.553

An XML Query System in a Wrapper System for Integrating Heterogeneous Biological Databases  

Park Eun-Koung (경상대학교 컴퓨터과학과 대학원)
Kang Dong-Wan (미디어코러스(주))
Jung Chai-Young (경상대학교 컴퓨터과학과 대학원)
Kim Hyun-Ju (진주산업대학교 컴퓨터공학부)
Bae Jong-Min (경상대학교 컴퓨터과학부/컴퓨터정보통신연구소)
Abstract
In order to integrate distributed biological information sources physically or virtually, it is necessary to overcome the heterogeneity of information sources and support a superior generality and adaptation in order to satisfy user's various demands. In this paper, we present a flexible and general XML query engine of a wrapper system in designing the middleware system to integrate data as well as application programs. Since this query engine applies user-defined XML view, it is possible to composite flexible integrated query. The query processing in a wrapper requires view composition, query translation into local sources, and generation of XML documents from local query results. We present a query processing model based on the view tree, where the n views and the XML queries are represented by the view tree. Moreover, to confirm the generality of our query processing model, we present a methodology of query processing for relational databases, web sources, and application programs whose return types of query results are relational tuples or XML documents.
Keywords
Intregration of Biological Information Sources; XML; XML View; User-defined XML View; XML Query Processing, Wrapper;
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