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http://dx.doi.org/10.13087/kosert.2021.24.6.133

Monitoring the presence of wild boar and land mammals using environmental DNA metabarcoding - Case study in Yangpyeong-gun, Gyeonggi-do -  

Kim, Yong-Hwan (Dept. of Landscape Architecture, Graduate School of Environmental Studies, Seoul National University)
Han, Youn-Ha (Dept. of Landscape Architecture, Graduate School of Environmental Studies, Seoul National University)
Park, Ji-Yun (Dept. of Landscape Architecture, Graduate School of Environmental Studies, Seoul National University)
Kim, Ho Gul (Dept. of Human Environment Design, Major in Landscape Urban Planning, Cheongju University)
Cho, Soo-Hyun (Plant Resources Division, National Institute of Biological Resources)
Song, Young-Keun (Dept. of Landscape Architecture, Graduate School of Environmental Studies, Seoul National University)
Publication Information
Journal of the Korean Society of Environmental Restoration Technology / v.24, no.6, 2021 , pp. 133-144 More about this Journal
Abstract
This study aims to estimate location of land mammals habitat by analyzing spatial data and investigate how to apply environmental DNA monitoring methodology to lotic system in Yangpyeong-gun, Gyeonggi-do. Environmental DNA sampling points are selected through spatial analysis with QGIS open source program by overlaying Kernel density of wild boar(Sus scrofa), elevation, slope and land-cover map, and 81 samples are collected. After 240 mL of water was filtered in each sample, metabarcoding technique using MiMammal universal primer was applied in order to get a whole list of mammal species whose DNA particles contained in filtered water. 8 and 22 samples showed DNA of wild boar and water deer, respectively. DNA of raccoon dog, Eurasian otter, and Siberian weasel are also detected through metabarcoding analysis. This study is valuable that conducted in outdoor lotic system. The study suggests a new wildlife monitoring methodology integrating overlayed geographic data and environmental DNA.
Keywords
Harmful animal; Sus scrofa; Hydropotes inermis; MiMammal; Lotic ecosystem;
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