Acidophilic Bacterial Communities of Soil and Enrichment Cultures from Two Abandoned Mine Sites of the Korean Peninsula |
Mishra, Debaraj
(Department of Microbiology & Molecular Biology, Chungnam National University)
Lee, Sun-Hee (Department of Microbiology & Molecular Biology, Chungnam National University) Kim, Jae-Hee (Department of Microbiology & Molecular Biology, Chungnam National University) Kim, Dong-Jin (Mineral Resources and Research Division, Korea Institute of Geoscience and Mineral Resources) Rhee, Young-Ha (Department of Microbiology & Molecular Biology, Chungnam National University) |
1 | Tan G-L, W-S Shu, KB Hallberg, F Li, C-Y Lan, W-H Zhou and L-N Huang. 2008. Culturable and molecular phylogenetic diversity of microorganisms in an open-dumped, extremely acidic Pb/Zn mine tailings. Extremophiles 12:657-664. DOI ScienceOn |
2 | Sahl JW, R Schmidt, ED Swanner, KW Mandernack, AS Templeton, TL Kieft, RL Smith, WE Sanford, RL Callaghan, JB Mitton and JR Spear. 2008. Subsurface microbial diversity in deep-granitic-fracture water in Colorado. Appl. Environ. Microbiol. 74:143-152. DOI ScienceOn |
3 | Schippers A, A Breuker, A Blazejak, K Bosecker, D Kock and TL Wright. 2010. The biogeochemistry and microbiology of sulfidic mine waste and bioleaching dumps and heaps, and novel Fe (II)-oxidizing bacteria. Hydromet. 104:342-350. DOI ScienceOn |
4 | Schippers A, P-G Jozsa, W Sand, ZM Kovacs and M Jelea. 2000. Microbiological pyrite oxidation in a mine tailings heap and its relevance to death of vegetation. Geomicrobiol. J. 17:151-162. DOI ScienceOn |
5 | Tamura K, J Dudley, M Nei and S Kumar. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599. DOI ScienceOn |
6 | Mishra D and YH Rhee. 2010. Current research trends of microbiological leaching for metal recovery from industrial wastes. pp. 1289-1296. In Current Research, Technology and Education Topics in Applied Microbiology and Microbial Biotechnology Volume 2 (Vilas AM ed.). Formatex Research Center, Spain. |
7 | Mu-quing Q, S-Y Xiong, W-M Hang and G-X Wang. 2005. A comparison of bioleaching of chalcopyrite using pure culture or a mixed culture. Minerals Engineering 18:987-990. DOI ScienceOn |
8 | Muyzer G, EC De Waal and AG Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700. |
9 | Nicomrat D, WA Dick and OH Tuovinen. 2006. Assessment of the microbial community in a constructed wetland that receives acid coal mine drainage. Microb. Ecol. 51:83-89. DOI ScienceOn |
10 | Rawlings DE. 2002. Heavy metal mining using microbes. Annu. Rev. Microbiol. 56:65-91. DOI ScienceOn |
11 | Liang HC and BM Thomson. 2009. Minerals and mine drainage. Water Environ. Res. 81:1615-1663. DOI |
12 | Rawlings DE and DB Johnson. 2007. The microbiology of biomining: development and optimization of mineral-oxidizing microbial consortia. Microbiol. 153:315-324. DOI ScienceOn |
13 | Kulp TR, SE Hoeft, M Asao, MT Madigan, JT Hollibaugh, JC Fisher, JF Stolz, CW Culbertson, LG Miller and RS Oremland. 2008. Arsenic (III) fuels anoxygenic photosynthesis in hot spring biofilms from Mono Lake, California. Science 321:967-970. DOI |
14 | Lee SH, JH Kim, D Mishra, Y-Y Ni and YH Rhee. 2011. Production of medium-chain-length polyhydroxyalkanoates by activated sludge enriched under periodic feeding with nonanoic acid. Bioresour. Technol. 102:6159-6166. DOI ScienceOn |
15 | Mishra D, DJ Kim, EE Ralph, JG Ahn and YH Rhee. 2008. Bioleaching of spent hydro-processing catalyst using acidophilic bacteria and its kinetic aspects. J. Hazard. Mater. 152:1082-1091. DOI ScienceOn |
16 | Jaffery GH, J Bassett, J Mendham and RC Denney. 1989. Text book of quantitative chemical analysis (5th Edition), pp. 490-493. Longman Scientific and Technical, New York. |
17 | Mishra D, DJ Kim, JG Ahn and YH Rhee. 2005. Bioleaching: A microbial process of metal recovery; a review. Met. Mater. Int. 11:249-256. DOI ScienceOn |
18 | Gonzalez-Toril E, A Aguilera, N Rodriguez, D Fernanedez-Remolar, F Gomez, E Diaz, A Garcia-Moyano, JL Sanz and R Amils. 2010. Microbial ecology of Rio Tinto, a natural extreme acidic environment of biohydrometallurgical interest. Hydromet. 104:329-333. DOI ScienceOn |
19 | Gurung A and R Chakraborty. 2009. The role of Acidithiobacillus ferrooxidans in alleviating the inhibitory effect of thiosulfate on the growth of acidophilic Acidiphilum species isolated from acid mine drainage samples from Garubathan, India. Can. J. Microbiol. 55:1040-1048. DOI ScienceOn |
20 | Joe SJ, K Soto, C Inoie and T Chida. 2007. Isolation and characterization of acidophilic heterotrophic iron-oxidizing bacterium from enrichment obtained from mine drainage treatment plant. J. Biosci. Bioeng. 104:117-123. DOI ScienceOn |
21 | Denef VJ, RS Mueller and JF Banfield. 2010. AMD biofilms: Using model communities to study microbial evolution and ecological complexity in nature. Int. Soc. Microbial. Ecol. 4:599-610. |
22 | Jung MC. 2001. Heavy metal contamination of soils and waters in and around the Imcheon Au-Ag mine, Korea. Appl. Geochem. 16:1369-1375. DOI ScienceOn |
23 | Jung MC. 2008. Heavy metal concentrations in soils and factors affecting metal uptake by plants in the vicinity of a Korean Cu-W mine. Sensors 8:2413-2423. DOI |
24 | Kim JS, SY Koo, JY Kim, EH Lee, SD Lee, KS Ko, DC Ko and KS Cho. 2009. Influence of acid mine drainage on microbial communities in stream and groundwater samples at Guryong mine, South Korea. Environ. Geol. 58:1567-1574. DOI ScienceOn |
25 | Dufresne S, J Bousquet, M Boissinot and R Guay. 1996. Sulfobacillus disulfidooxidans sp. nov., a new acidophilic, disulfide-oxidizing, gram-positive, spore-forming bacterium. Int. J. Syst. Bacteriol. 46:1056-1064. DOI ScienceOn |
26 | Druschel GK, BJ Baker, TM Gihring and JF Banfield. 2004. Acid mine drainage biogeochemistry at Iron Mountain, California. Geochem. Trans. 5:13-32. DOI |
![]() |