Browse > Article

Genetic Identification of Hybrids between Rhodeus uyekii and R. notatus by Sequence Analysis of RAG-1 Gene  

Yun, Young-Eun (Department of Marine Biotechnology, Soonchunhyang University)
Lee, Il-Ro (Department of Marine Biotechnology, Soonchunhyang University)
Park, Sang-Yong (Department of Marine Biotechnology, Soonchunhyang University)
Kang, Eon-Jong (Southern Regional Inland Research Institute, NFRDI)
Kim, Eung-O (Southern Regional Inland Research Institute, NFRDI)
Yang, Sang-Keun (Southern Regional Inland Research Institute, NFRDI)
Nam, Yoon-Kwon (Department of Aquaculture, Pukyong National University)
Bang, In-Chul (Department of Marine Biotechnology, Soonchunhyang University)
Publication Information
Journal of Aquaculture / v.22, no.1, 2009 , pp. 79-82 More about this Journal
Abstract
Reciprocal interspecific hybrids between two bitterling species Rhodeus uyekii (RU) and R. notatus (RN) were genetically identified based on the partial sequence analysis of recombination activating gene-1 (RAG-1) gene. Out of 863 bp positions analyzed, 13 nucleotide substitutions were detected between the two parental species (RU and RN genotypes). Both the induced hybrids (RU female$\times$RN male; UN genotype) and their reciprocal counterparts (RN female$\times$RU male; NU genotype) displayed the double peaks (or polymorphism) of sequence chromatograms at the 13 diagnostic positions, indicating that those hybrids were actual karyogamy derived from the two parental haploid genomes. However, it was not possible to distinguish between the reciprocal interspecific hybrids.
Keywords
Hybrids; Bitterlings; Rhodeus uyekii; R. notatus; RAG-1; Sequence polymorphism;
Citations & Related Records
연도 인용수 순위
  • Reference
1 Kanoh, Y., 2000. Reproductive success associated with territoriality, sneaking, and grouping in male rose bitterlings, Rhodeus ocellatus (Pisces: Cyprinidae). Environ. Biol. Fishes., 57, 143- 154   DOI   ScienceOn
2 Kim, I.-J., 1997. A osteological study of Rhodeus uyekii. Kor. J. Ichthyol., 9, 130-140. (in Korean)
3 Kim, H. S., Y. H. Kim, S. H. Cho and J.-Y. Jo, 1999b. Effects of dietary carotenoids on the nuptial color of the bitterling (Rhodeus uyekii). J. Kor. Fish. Soc., 32, 276-279. (in Korean)
4 Slechtova, V., J. Bohlen and H.H. Tan, 2007. Families of Cobitoidea (Teleostei: Cypriniformes) as revealed from nuclear genetic data and the position of the mysterious genera Barbucca, Psilorhynchus, Swepenticobitis and Vaillantella. Mol. Phyl. Evol., 44, 1358-1365   DOI   ScienceOn
5 Sonnenberg, R., A. Nolte and D. Tautz, 2007. An evaluation of LSU rDNA DI-D2 sequences for their use in species identification. Front. Zool., 4, 6   DOI   PUBMED
6 Hall, T. A., 1999. BioEdit: A user-friendly biogical sequence aligment editor and analysis program for windows 95/98/NT. Nucl. Acids. Symp. Ser., 41, 95-98
7 Kuriiwa, K., N. Hanzawa, T. Yoshino, S. Kimura and M. Nishida, 2007. Phylogenetic relationships and natural hybridization in rabbitfishes (Teleostei: Siganidae) inferred from mitochondrial and nuclear DNA analyses. MoL Phyl. Evol., 45, 69-80   DOI   ScienceOn
8 Quenouille, B., E. Bermingham and S. Planes 2004. Molecular systematic of the damselfishes (Teleostei: Pomacentridae): Bayesian phylogenetic analyses of mitochondrial and nuclear DNA sequences. Mol. Phyl. Evol., 31, 66-88   DOI   ScienceOn
9 Suzuki, N., N. Akiyama and T. Hibiya, 1985. Development ofthe bitterling, Rhodeus uyekii (Cyprinidae), with a note on minute tubercles on the skin surface. Jap. J. Ichthyol., 32, 28-34
10 Jansson, H., I. Holmgren, K. Wedin and T Andersson, 1991. High frequency of natural hybrids between Atlantic salmon, Salmo salar L., and brown trout, S. trutta L., in a Swedish river. J. Fish Biol., 39, 343-348
11 Busse, K., J. Freyhof and A. Zarske, 1999. Serum-electrophoretic pattems of various cyprinid hybrids from the rivers Elbe and Sieg (Teleostei: Cyprinidae). Abh. Mus. Tierk. Dresden., 21, 265-272
12 Kang, E.-J., E.-M. Kim, Y. J. Kim, S. G Lee, D. S. Sim, Y.-H. Kim and I.-S. Park, 2005. Effect of lidocaine hydrochloride and clove oil as anaesthetic on Korean rose bitterling, Rhodeus uyekii and bitterling, Acheilognathus koreensis. J. Aquacult., 18, 272-279. (in Korean)
13 Kawamura, K. and K. Hosoya, 2000. Masculinization mechanism ofhybrids in bitterlings (Teleostei: Cyprinidae). J. Hered., 91, 464-473   DOI   ScienceOn
14 Wendel, J. F. and J. J. Doyle, 1998. Phylogenetic incongruence: Window into genome history and molecular evolution. In: Soltis, D.E., Soltis, P.S., Doyle, J.J. (Eds.), Molecular Systematics of Plants II: DNA Sequencing. Kluwer Academic Publishers, Boston, pp. 265-296
15 Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin and D. G. Higgins, 1997. The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 25, 4876-4882   DOI   ScienceOn
16 Suzuki, N. and S.-R. Jeon, 1988b. Hybridization experiments in acheilognathine fishes (Cyprinidae), an intrageneric hybrid between Rhodeus suigensis and R. uyekii. Kor. J. Limnol., 21, 57-78. (in Korean)
17 Groth, J. G and G F. Barrowclough, 1999. Basal divergences in birds and the phylogenetic utility of the nuclear RAG-I gene. Mol. Phyl. Evol., 12, 115-123   DOI   ScienceOn
18 Suzuki, N. and S.-R. Jeon, 1988a. Hybridization experiments in acheilognathine fishes (Cyprinidae), an intrageneric hybrid between Rhodeus uryekii and R. ocellatus smithi. Kor. J. Limnol., 21, 129-142. (in Korean)
19 Candolin, U. and J. D. Reynolds, 2002. Why do males tolerate sneakers? Tests with the European bitterling, Rhodezιs serzceus. Behav. Ecol. Sociobiol., 51, 146-152   DOI   ScienceOn
20 Asahida, T., T. Kobayashi, K. Saitoh and I. Nakayama, 1996. Tissue preservation and total DNA extraction from fish stored at ambient temperature using buffers containing high concentration of urea. Fish. Sci., 62, 727-730   DOI   ScienceOn
21 Kang, E.-J., C.-H. Kim, I.-S. Park, H. Yang and Y.-C. Cho, 2006. Early developmental charaterristics of Induced hybrids between Rhodeus uyekii and R. notaus (Pisces: Cyprinidae). Kor. J. Ichthyol., 18, 339-346. (in Korean)
22 Kim, Y. U. and K. H. Han, 1990. Early life history of the Korean bitterling, Rhodeus uyekii (Cyprinidae), with a note on minute tubercles on the skin surface. Kor. J. Ichthyol., 2, 159-168. (in Korean)
23 Cebrat, M., A. Cebula, A. Laszk:iewicz,M. Kasztura, A. Miazek and P. Kisielow, 2008. Mechanism of Iymphocyte-specific inactivation of RAG-2 intragenic promoter of NWC: Implications for epigenetic control of RAG locus. Mol. Immunol., 45, 2297-2306   DOI   ScienceOn
24 Kim, H. S., Y. H. Kim, J.-Y. Jo, G. H. Yoon and B.-S. Ha, 1999a. Nuptial color component of Korean rose bitterling (Rhodeus uryekii). J. Kor. Fish. Soc., 32, 520-524. (in Korean)