Browse > Article
http://dx.doi.org/10.3347/kjp.2019.57.5.481

Mitochondrial DNA Sequence Variability of Spirometra Species in Asian Countries  

Jeon, Hyeong-Kyu (Department of Parasitology, Parasite Research Center and Parasite Resource Bank, Chungbuk National University School of Medicine)
Eom, Keeseon S. (Department of Parasitology, Parasite Research Center and Parasite Resource Bank, Chungbuk National University School of Medicine)
Publication Information
Parasites, Hosts and Diseases / v.57, no.5, 2019 , pp. 481-487 More about this Journal
Abstract
Mitochondrial DNA sequence variability of Spirometra erinaceieuropaei in GenBank was observed by reinvestigation of mitochondrial cox1 and cytb sequences. The DNA sequences were analyzed in this study, comprising complete DNA sequences of cox1 (n=239) and cytb (n=213) genes. The 10 complete mitochondrial DNA sequences of Spirometra species were compared with those of Korea, China and Japan. The sequences were analyzed for nucleotide composition, conserved sites, variable sites, singleton sites and parsimony-informative sites. Phylogenetic analyses was done using neighbor joining, maximum parsimony, Bayesian inference and maximum-likelihood on cox1 and cytb sequences of Spirometra species. These polymorphic sites identified 148 (cox1) and 83 (cytb) haplotypes within 239 and 213 isolates from 3 Asian countries. Phylogenetic tree topologies were presented high-level confidence values for the 2 major branches of 2 Spirometra species containing S. erinaceieuropaei and S. decipiens, and S. decipiens sub-clades including all sequences registered as S. erinaceieuropaei in cox1 and cytb genes. These results indicated that mitochondrial haplotypes of S. erinaceieuropaei and S. decipiens were found in the 3 Asian countries.
Keywords
Spirometra erinaceieuropaei; Spirometra decipiens; mitochondria; DNA sequence variability;
Citations & Related Records
Times Cited By KSCI : 3  (Citation Analysis)
연도 인용수 순위
1 Eom KS, Park HS, Lee DM, Choe SJ, Kim KH, Jeon HK. Mitochondrial genome sequences of Spirometra erinaceieuropaei and S. decipiens (Cestoidea: Diphyllobothriidae). Korean J Parasitol 2015; 53: 455-463.   DOI
2 Boore JL. Animal mitochondrial genomes. Nucleic Acids Res 1992; 27: 1767-1780.   DOI
3 Zhu XQ, Beveridge I, Berger L, Barton D, Gasser RB. Single-strand conformation polymorphism-based analysis reveals genetic variation within Spirometra erinacei (Cestoda: Pseudophyllidea) from Australia. Mol Cell Probes 2002; 16: 159-165.   DOI
4 Liu W, Zhao GH, Tan MY, Zeng DL, Wang KZ, Yuan ZG, Lin RQ, Zhu XQ, Liu Y. Survey of Spirometra erinaceieuropaei spargana infection in the frog Rana nigromaculata of the Hunan Province of China. Vet Parasitol 2010; 173: 152-156.   DOI
5 Liu W, Liu GH, Li F, He DD, Wang T, Sheng XF, Zeng DL, Yang FF, Liu Y. Sequence variability in three mitochondrial DNA regions of Spirometra erinaceieuropaei spargana of human and animal health significance. J Helminthol 2012; 86: 271-275.   DOI
6 Zhang X, Cui J, Wei T, Li LY, Jiang J, Lu JC, Jiang P, Liu LN, Wang ZQ. Survey and genetic variation of Spirometra erinaceieuropaei sparganum in frogs and snakes from Guangxi of southern China. Trop Biomed 2014; 31: 862-870.
7 Zhang X, Wang H, Cui J, Jiang P, Fu GM, Zhong K, Zhang ZF, Wang ZQ. Characterization of the relationship between Spirometra erinaceieuropaei and Diphyllobothrium species using complete cytb and cox1 genes. Infect Genet Evol 2015: 35: 1-8.   DOI
8 Zhang X, Cui J, Liu LN, Jiang P, Wang H, Qi X, Wu XQ, Wang ZQ. Genetic structure analysis of Spirometra erinaceieuropaei isolates from Central and Southern China. PLoS One 2015; 10: e0119295.   DOI
9 Benson DA, Cavanaugh G, Clark K, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW. GenBank. Nucleic Acids Research 2013; 41: 36-42.   DOI
10 Wei T, Zhang J, Cui J, Liu LN, Jiang P, Wang ZQ. Levels of sparganum infections and phylogenetic analysis of the tapeworm Spirometra erinaceieuropaei sparganum in wild frogs from Henan Province in central China. J Helminthlo 2015; 89: 433-438.   DOI
11 Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA7 molecular evolutionary genetics analysis using maximum likelihood evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011; 25: 2731-2739.
12 Lanfear R, Calcott B, Hos YW, Guindon S. Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol 2012; 29: 1695-1701.   DOI
13 Librado P, Rozas J. DnaSP6: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 2009; 25: 1451-1452.   DOI
14 Swofford DL. Paup*: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sunderland, USA. Sinauer Associates. 2003.
15 Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006; 22: 2688-2690.   DOI
16 Zhang X, Wang H, Cui J, Jiang P, Lin ML, Zhang YL, Liu RD, Wang ZQ. The phylogenetic diversity of Spirometra erinaceieuropaei isolates from southwest China revealed by multi genes. Acta Trop 2016; 156: 108-114.   DOI
17 Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003; 19: 1572-1574.   DOI
18 Chandler AC. The helminthic parasites of cats in Calcutta and the relation of cats to human helminthic infections. Indian J Med Res 1925; 13: 213-227.
19 Jeon HK, Park HS, Lee DM, Choe SJ, YS Kang, Bia MM, Lee SH, Sohn WM, Hong SJ, Chai JY, Eom KS. Genetic and morphologic identification of Spirometra ranarum in Myanmar. Korean J Parasitol 2018; 56: 275-280.   DOI
20 Mueller JF. New host records for Diphyllobothrium mansonoides Mueller 1935. J Parasitol 1937; 23: 313-315.   DOI
21 Okamoto M, Iseto S, Shibahara T, Sato MO, Wandra T, Craig PS, Ito A. Intraspecific variation of Spirometra erinaceieuropaei and phylogenetic relationship between Spirometra and Diphyllobothrium inferred from mitochondrial CO1 gene sequence. Parasitol Int 2007; 56: 235-238.   DOI
22 Liu Q, Li MW, Wang ZD, Zhao GH, Zhu XQ. Human sparganosis, a neglected food borne zoonosis. Lancet Infect Dis 2015; 15: 1226-1235.   DOI
23 Eberhard ML, Thiele EA, Yembo GE, Yibi MS, Cama VA, Ruiz-Tiben E. Thirty-seven human cases of sparganosis from Ethiopia and South Sudan caused by Spirometra spp. Am J Trop Med Hyg 2015; 93: 350-355.   DOI
24 Nelson GS, Pester FR, Rickman R. The significance of wild animals in the transmission of cestodes of medical importance in Kenya. Trans R Soc Trop Med Hyg 1965; 59: 507-524.   DOI
25 Almeida GG, Coscarelli D, Melo MN, Melo AL, Pinto HA. Molecular identification of Spirometra spp. (Cestoda: Diphyllobothiidae) in some wild animals from Brazil. Parasitol Int 2016; 65: 428-431.   DOI
26 Cho SY, Bae JH, Seo BS. Some aspects of human sparganosis in Korea. Korean J Parasitol 1975; 13: 60-77.   DOI
27 Boonyasiri A, Cheunsuchon P, Suputtamongkol Y, Yamasaki H, Sanpool O, Maleewong W, Intapan PM. Nine human sparganosis cases in Thailand with molecular identification of causative parasite species. Am J Trop Med Hyg 2014; 51: 389-393.   DOI
28 Faust EC, Campbell HE, Kellogg CR. Morphological and biological studies on the species of Diphyllobothrium in China. Am J Epidemiol 1929; 9: 560-583.   DOI
29 Muller JF. New host records for Diphyllobothrium mansonoides Mueller, 1935. J Parasitol 1937; 23: 313-315.
30 Wardle RA, McLeod JA. The Zoology of Tapeworms. Minneapolis, USA. University of Minnesota Press. 1952, pp 559-615.
31 Yamaguti S. Systema Helminthum. Vol. II. The cestodes of vertebrates. New York, USA. Interscience Publishers. 1959, pp 358-361.
32 Iwata S. Experimental and morphological studies of Manson's tapeworm, Diphyllobothrium erinacei, Rudolphi. Special reference with its scientific name and relationship with Sparganum proliferum, Ijima. Progress Med Parasitol Jpn 1972; 4: 536-590.
33 Kamo H. Guide to Identification of diphyllobothriid cestodes. Tokyo, Japan. Gendai Kikaku. 1999, pp 1-146 (in Japanese).
34 Jeon HK, Park HS, Lee DM, Choe SJ, Kim KH, Huh S, Sohn WM, Chai JY, Eom KS. Human infections with Spirometra decipiens plerocercoids identified by morphologic and genetic analyses in Korea. Korean J Parasitol 2015; 53: 299-305.   DOI