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http://dx.doi.org/10.9710/kjm.2013.29.4.335

Analysis of genetic divergence according to each mitochondrial DNA region of Haliotis discus hannai  

Park, Choul-Ji (Genetics and Breeding Research Center, NFRDI)
Nam, Won Sick (Genetics and Breeding Research Center, NFRDI)
Lee, Jeong-Ho (Genetics and Breeding Research Center, NFRDI)
Noh, Jae Koo (Genetics and Breeding Research Center, NFRDI)
Kim, Hyun Chul (Genetics and Breeding Research Center, NFRDI)
Park, Jong Won (Genetics and Breeding Research Center, NFRDI)
Hwang, In Jun (Genetics and Breeding Research Center, NFRDI)
Kim, Sung Yeon (Genetics and Breeding Research Center, NFRDI)
Publication Information
The Korean Journal of Malacology / v.29, no.4, 2013 , pp. 335-341 More about this Journal
Abstract
The seven mitochondrial DNA regions (ND2, ND5, ND4, ND4L, ND6, ND1 and 12SrRNA) of Haliotis discus hannai were examined to estimate the availability as a genetic marker for the study of population genetic. The region with the highest genetic variation was ND4 (Haplotype diversity = 1.0000, Nucleotide diversity = 0.0108). On the other hand, ND2 and ND1 regions have significantly appeared genetic divergence between clusters (divergence of 90% and 87%). Also, pairwise $F_{ST}$ between clusters within ND2 and ND1 regions showed high values; 0.4061 (P = 0.0000), 0.4805 (P = 0.0000) respectively. Therefore we can infer that it is the most efficient and accurate way to analyze the region of ND4 with the highest variation in addition to the regions of ND2 and ND1, which formed clusters with high bootstrap value, for study of population genetic structure in this species.
Keywords
mitochondrial DNA; genetic diversity; Haliotis discus hannai;
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