[KSCI] Korea Science Citation Index Service

http://dx.doi.org/10.4142/jvs.2018.19.6.855

First detection and genetic characterization of porcine parvovirus 7 from Korean domestic pig farms

Ouh, In-Ohk (Viral Disease Research Division, Animal and Plant Quarantine Agency)
Park, Seyeon (Viral Disease Research Division, Animal and Plant Quarantine Agency)
Lee, Ju-Yeon (Viral Disease Research Division, Animal and Plant Quarantine Agency)
Song, Jae Young (Viral Disease Research Division, Animal and Plant Quarantine Agency)
Cho, In-Soo (Viral Disease Research Division, Animal and Plant Quarantine Agency)
Kim, Hye-Ryung (College of Veterinary Medicine & Animal Disease Intervention Center, Kyungpook National University)
Park, Choi-Kyu (College of Veterinary Medicine & Animal Disease Intervention Center, Kyungpook National University)

Publication Information

Journal of Veterinary Science / v.19, no.6, 2018 , pp. 855-857 More about this Journal

Abstract

Porcine parvovirus 7 (PPV7) was first detected in Korean pig farms in 2017. The detection rate of PPV7 DNA was 24.0% (30/125) in aborted pig fetuses and 74.9% (262/350) in finishing pigs, suggesting that PPV7 has circulated among Korean domestic pig farms. Phylogenetic analysis based on capsid protein amino acid sequences demonstrated that the nine isolated Korean strains (PPV-KA1-3 and PPV-KF1-6) were closely related to the previously reported USA and Chinese PPV7 strains. In addition, the Korean strains exhibit genetic diversity with both insertion and deletion mutations. This study contributes to the understanding of the molecular epidemiology of PPV7 in Korea.

Keywords

Korea; aborted fetus; detection; pig farm; porcine parvovirus 7;

Citations & Related Records

Reference

1	Le SQ, Gascuel O. An improved general amino acid replacement matrix. Mol Biol Evol 2008, 25, 1307-1320. DOI
2	Lee JY, Kim EJ, Cho IS, Lee KK, Shin YK. Complete genome sequences of porcine parvovirus 2 isolated from swine in the Republic of Korea. Genome Announc 2017, 5, e01738-16.
3	Oh WT, Kim RY, Nguyen VG, Chung HC, Park BK. Perspectives on the evolution of porcine parvovirus. Viruses 2017, 9, 196. DOI
4	Palinski RM, Mitra N, Hause BM. Discovery of a novel Parvovirinae virus, porcine parvovirus 7, by metagenomic sequencing of porcine rectal swabs. Virus Genes 2016, 52, 564-567. DOI
5	Streck AF, Canal CW, Truyen U. Molecular epidemiology and evolution of porcine parvoviruses. Infect Genet Evol 2015, 36, 300-306. DOI
6	Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 2013, 30, 2725-2729. DOI
7	Xiao CT, Gimenez-Lirola LG, Jiang YH, Halbur PG, Opriessnig T. Characterization of a novel porcine parvovirus tentatively designated PPV5. PLoS One 2013, 8, e65312. DOI
8	Xing X, Zhou H, Tong L, Chen Y, Sun Y, Wang H, Zhang G. First identification of porcine parvovirus 7 in China. Arch Virol 2018, 163, 209-213. DOI

Reference

5	(2019) Viruses Detection Patterns of Porcine Parvovirus (PPV) and Novel Porcine Parvoviruses 2 through 6 (PPV2-PPV6) in Polish Swine Farms / 11 (5) , 474
7	(2018) PLoS ONE Sequence and phylogenetic analysis of novel porcine parvovirus 7 isolates from pigs in Guangxi, China / 14 (7) , e0219560
10	(2019) Viruses High Diversity and Novel Enteric Viruses in Fecal Viromes of Healthy Wild and Captive Thai Cynomolgus Macaques (Macaca fascicularis) / 11 (10) , 971
5	(2018) Microbiology and immunology A retrospective study of DNA prevalence of porcine parvoviruses in Mexico and its relationship with porcine <I>circovirus</I> associated disease / 64 (5) , 366
3	(2020) Vaccines Porcine Parvovirus 7: Evolutionary Dynamics and Identification of Epitopes toward Vaccine Design / 8 (3) , 359
None	(2018) BMC veterinary research PCR-based detection and genetic characterization of porcine parvoviruses in South Korea in 2018 / 16 (None) , 113
1	(2021) PLoS ONE Evaluation of a multiplex PCR method for the detection of porcine parvovirus types 1 through 7 using various field samples / 16 (1) , e0245699
3	(2021) Archives of virology First investigation of the prevalence of parvoviruses in slaughterhouse pigs and genomic characterization of ungulate copiparvovirus 2 in Vietnam / 166 (3) , 779
1	(2018) Journal of veterinary research The main DNA viruses significantly affecting pig livestock / 65 (1) , 15
12	(2018) PLoS ONE The first report of porcine parvovirus 7 (PPV7) in Colombia demonstrates the presence of variants associated with modifications at the level of the VP2-capsid protein / 16 (12) , e0258311