Morphology, Molecular Phylogeny and Pathogenicity of Colletotrichum panacicola Causing Anthracnose of Korean Ginseng |
Choi, Kyung-Jin
(Crop Protection Division, National Academy of Agricultural Science (NAAS), RDA)
Kim, Wan-Gyu (Crop Protection Division, National Academy of Agricultural Science (NAAS), RDA) Kim, Hong-Gi (Department of Agricultural Biology, Chungnam National University) Choi, Hyo-Won (Crop Protection Division, National Academy of Agricultural Science (NAAS), RDA) Lee, Young-Kee (Crop Protection Division, National Academy of Agricultural Science (NAAS), RDA) Lee, Byung-Dae (Bioresource Development Institute, Herbking Inc. Hankyong University) Lee, Sang-Yeob (Agricultural Microbiology Team, NAAS, RDA) Hong, Sung-Kee (Crop Protection Division, National Academy of Agricultural Science (NAAS), RDA) |
1 | Talhinhas, P. S., Sreenivasaprasad, J. Neves-Martins and H. Oliveira. 2002. Genetic and morphological characterization of Colletotrichum acutatum causing anthracnose of lupins. Phytopathology 92:986-996. DOI ScienceOn |
2 | Talhinhas, P. S., Sreenivasaprasad, J., Neves-Martins, H. and Oliveira 2005. Molecular and phenotypic analyses reveal association of diverse Colletotrichum acutatum groups and a low level of C. gloeosporioides with anthracnose. Appl. Environ. Microbiol. 71:2987-2998. DOI ScienceOn |
3 | Tamura, K., Dudley, J., Nei, M. and Kumar, S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599. DOI ScienceOn |
4 | Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. and Higgins, D. G. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-82. DOI |
5 | Whitelaw-Weckert, M. A., Curtin, S. J., Huang, R., Steel, C. C., Blanchard, C. and Roffey, P. E. 2007. Phylogenetic relationships and pathogenicity of Colletotrichum acutatum isolates from grape in subtropical Australia. Plant Pathol. 56:448-463. DOI ScienceOn |
6 | White, T. J., Bruns, T., Lee, S. and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M. A., Gelfand, D. H., Sninsky, J. J. and White, T. J. eds. PCR protocols, a guide to methods and applications. New York, USA: Academic Press, 315-322. |
7 | Yu, Y. H. 1992. The status of past and present research on ginseng diseases in Korea. Korean J. Ginseng Sci. 16:162-163 (in Korean). |
8 | Yu, Y. H. and Ohh, S. H. 1993. Research on ginseng diseases in Korea. Korean J. Ginseng Sci. 17:61-68 (in Korean). 과학기술학회마을 |
9 | Moriwaki, J., Tsukiboshi, T. and Sato, T. 2002. Grouping of Colletotrichum species in Japan based on rDNA sequences. J. Gen. Plant Pathol. 68:307-320. DOI |
10 | Nakada, K. and Takimoto, S. 1922. Studies on ginseng diseases in Korea. Bull. Agri. Exp. Stat. Chosen 5:1-81 (in Japanese). |
11 | Nirenberg, H. I., Feiler, U. and Hagedorn, G. 2002. Description of Colletotrichum lupini comb. nov. in modern terms. Mycologia 94:307-320. DOI |
12 | O’Donnell, K. E., Cigelnik, H. I. and Nirenberg 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90:465-493. DOI |
13 | Rehner, S. A. 2001. Primers for elongation factor 1- (EF1-a). http://www.nacse.org/yfaaberg /aftol/EF1primer.pdf. |
14 | Saitou, N. and Nei, M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425. |
15 | Sreenivasaprasad, S., Mills, P. R., Meehan, B. M. and Brown, A. E. 1996. Phylogeny and systematics of 18 Colletotrichum species based on ribosomal DNA spacer sequences. Genome 39:499-512. DOI ScienceOn |
16 | Stewart, C. N. and Via, L. E. 1993. A rapid CTAB DNA isolation technique useful for RAPD fingerprinting and other PCR applications. Biotechniques 14:748-749. |
17 | Sutton, B. C. 1980. The Coelomycetes: Fungi Imperfecti with Pycnidia, Acervuli and Stromata. Commonwealth Mycological Institute, Kew, Surrey, England. |
18 | Sutton, B. C. 1992. The genus Glomerella and its anamorph Colletotrichum. In: Colletotrichum: Bailey, J. A. and Jeger, M. J. eds. Biology, Pathology and Control. CAB International, Wallingford, Oxon, UK. |
19 | Takimoto, S. 1919. Colletotrichum panacicola Uyeda and Takimoto. Chosen Nokwai ho 14:24-25 (In Japanase). |
20 | Chung, H. S. and Bae, H. W. 1979. Ginseng anthracnose in Korea: Factors affecting primary inoculum, growth of the pathogen, disease development and control. Korean J. Plant Protect. 18:35-41. 과학기술학회마을 |
21 | Farr, D. F., Aime, M. C., Rossman, A. Y. and Palm, M. E. 2006. Species of Colletotrichum on Agavaceae. Mycol. Res. 110: 1395-1408. DOI ScienceOn |
22 | Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791. DOI ScienceOn |
23 | Guerber, J. C. Correll, J. C. and Johnston, P. R. 2003. Characterization of diversity in Colletotrichum acutatum sensu lato by sequence analysis of two gene introns, mtDNA and intron RFLPs, and mating compatibility. Mycologia 95:872-895. DOI |
24 | Gunnell, P. S. and Gubler, W. D. 1992. Taxonomy and morphology of Colletotrichum species pathogenic on strawberry. Mycologia 84:157-165. DOI |
25 | Johnston, P. R. and Jones, D. 1997. Relationships among Colletotrichum isolates from fruit-rots assessed using rDNA sequences. Mycologia 89:420-430. DOI |
26 | Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120. DOI |
27 | Lubbe, C. M., Denman, S., Cannon, P. F., Groenewald, J. Z., Lamprecht, S. C. and Crous, P. W. 2004. Characterization of Colletotrichum species associated with disease of Proteaceae. Mycologia 96:1268-1279. DOI |
28 | Mcpartland, J. M. 1985. Organisms isolated from soil previously planted in American ginseng. Hamburg, WI: Fromm Brothers, Inc: Technical Report, Supplement. 5pp. |
29 | Mcpartland, J. and Hosoya, T. 1998. Species of Colletotrichum on ginseng (panax). Mycotaxon 67:3-8. |
30 | Cano, J., Guarro, J. and Gene, J. 2004. Molecular and morphological identification of Colletotrichum species of clinical interest.J. Clin. Microbiol. 42:2450-2454. DOI ScienceOn |
31 | Carbone, I. and Kohn, L. M. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553-556. DOI |