Global Analysis of Gene Expression upon Acid Treatment in Arabidopsis thaliana |
Kim, Jung-Koo
(Department of Biology, University of Incheon)
Baek, Seung-A (Department of Biology, University of Incheon) Yoon, Seok-Joo (Toxicogenomics Team, Korea Institute of Toxicology) Park, Han-Jin (Toxicogenomics Team, Korea Institute of Toxicology) Lee, Suk-Chan (Department of Genetic Engineering, Sungkyunkwan University) Lee, Tae-Soo (Department of Biology, University of Incheon) Im, Kyung-Hoan (Department of Biology, University of Incheon) |
1 | Branco-Price, C., Kawaguchi, R., Ferreira, R. B. and Bailey-Serres, J. 2005. Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation. Ann. Bot. (Lond) 96:647-660 DOI ScienceOn |
2 | Evans, L. S. and Curry, T. M. 1979. Differential responses of plant foliage to simulated acid rain. Am. J. Bot. 66:953-962 DOI ScienceOn |
3 | Foy, C. D. 1984. Physiological Effects of Hydrogen, Aluminum and Manganese Toxicities in Acid Soil. In: Soil Acidity and Liming, ed. by R. W. Pearson and F. Adams, pp. 57-97. Amer. Soc. Agronomy, Madison, Wisconsin, USA |
4 | LeBrasseur, N. D., MacIntosh, G. C., Perez-Amador, M. A., Saitoh, M. and Green, P. J. 2002. Local and systemic woundinduction of RNase and nuclease activities in Arabidopsis: RNS I as a marker for a JA-independent systemic signaling pathway. Plant J. 29:393-403 DOI ScienceOn |
5 | Lee, Y., Park, J., Im, K. H., Kim, K., Lee, J, Lee, K., Park, J. A., Lee, T. K., Park, D. S., Yang, J. S., Kim, D. and Lee, S. 2006. Arabidopsis leaf necrosis caused by simulated acid rain is related to the salicylic acid signaling pathway. Plant Physiol. Biochem. 44:38-42 DOI ScienceOn |
6 | Melan, M. A., Dong, X., Endara, M. E., Davis, K. R., Ausubel, F. M. and Petennan, T. K. 1993. An Arabidopsis thaliana lipoxygenase gene can be induced by pathogens, abscisic acid, and methyl jasmonate. Plant Physiol. 101 :441-450 DOI ScienceOn |
7 | Ocampo, C. A., Moerschbacher, B. and Grambow, H. l. 1986. Increased lipoxygenase activity is involved in the hypersensitive response of wheat leaf cells infected with avirulent rust fungi or treated with fungal elicitor. Z. Natuiforsch 41:559-563 |
8 | Park, J. B. and Lee, S. C. 1999. Growth responses of Arabidopsis thaliana exposed to simulated acid rain. J. Kor. Soc. Hort. Sci. 41:653-656 |
9 | Rizhsky, L., Liang, H., Shuman, J, Shulaev, V., Davletova, S. and Mittler, R. 2004. When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. Plant Physiol. 134: 1683-1696 DOI PUBMED ScienceOn |
10 | Merkouropoulos, G, Bamett, D. C. and Shirsat, A. H. 1999. The Arabidopsis extensin gene is developmentally regulated, is induced by wounding, methyl jasmonate, abscisic and salicylic acid, and codes for a protein with unusual motifs. Planta 208:212-219 DOI ScienceOn |
11 | Showalter, A. M. and Rumeau, D. 1990. Molecular biology of the plant cell wall hydroxyproline-rich glycoproteins. In: Organization and assembly of plant and animal extracellular matrix, ed. by W. S. Adair and R. P. Mecham, pp. 247-281. Academic Press, New York. USA |
12 | Kim, Y. S. 2006. Analysis of gene expression upon DNA damage in Arabidopsis. J. Plant Biology 49:298-302 DOI ScienceOn |
13 | Delhaize, E. and Ryan, P. R. 1995. Aluminum toxicity and tolerance in plants. Plant Physiol. 107:315-321 DOI PUBMED |
14 | Choi, J. W., Kim, G. B., Huh, Y. C., Kwon, M. R., Mok, J. G., Kim, J. W., Lee, T. S., Kim, S. and Im, K. H. 2004. Cloning of genes differentially expressed during the initial stage of fruit development in melon (Cucumis melD cv. Reticulatus). Mol. Cells 17:237-241 PUBMED |
15 | Koussevitzky, S., Suzuki, N., Huntington, S., Armijo, L., Sha, W, Cortes, D., Shulaev, V. and Mittler, R. 2008. Ascorbate peroxidase 1 plays a key role in the response of Arabidopsis thaliana to stress Combination. J. Biol. Chem. 283:34197-34203 DOI ScienceOn |
16 | Derikvand, M., Sierra, J. B., Ruel, K., Pollet, B., Do. C., Thevenino J., Buffard, D., Jouanin, L. and Lapierre, C. 2008. Redirection of the phenylpropanoid pathway to feruloyl malate in Arabidopsis mutants deficient for cinnamoyl-CoA reductase I. Planta 227:943-956 DOI ScienceOn |
17 | Foy, C. D. 1988. Plant adaptation to acid, aluminum-toxic soils. Commun. Soil Sci. Plant Anal. 19:959-987 DOI |
18 | Bell, E. and Mullet, J. E. 1991. Lipoxygenase gene expression is modulated in plants by water deficit, wounding, and methyl jasmonate. Mol. Gen. Genet. 230:456-462 DOI ScienceOn |
19 | Murashige, T. and Skoog, F. 1962. A revised medium for rapid growth and bio-assays with tobacco tissue cultures. Physiologia Plantarum 15:473-497 DOI |
20 | Tire, C., Rycke, R. D., Loose, M. D., Inze, D., Montagu, M. V. and Engler, G 1994. Extensin gene expression is induced by mechanical stimuli leading to local cell wall strengthening in Nicotiana plumbaginifolia. Planta 195: 175-181 DOI PUBMED |
21 | Zhang, Y. and Wang, L. 2005. The WRKY transcription factor superfamily: its origin in eukaryotes expansion in plants. BMC Evol. Biol. 5: 1-12 DOI PUBMED ScienceOn |
22 | Brosche, M. and Strid, A. 2003. Molecular events following perception of ultraviolet-B radiation by plants. Physiol. Plant. 117:1-10 DOI ScienceOn |