Lee, Youngdeuk
(Korea Institute of Ocean Science and Technology)
Jo, Eunyoung (Korea Institute of Ocean Science and Technology) Lee, Yeon-Ju (Korea Institute of Ocean Science and Technology) Hettiarachchi, Sachithra Amarin (Korea Institute of Ocean Science and Technology) Park, Gun-Hoo (Korea Institute of Ocean Science and Technology) Lee, Su-Jin (Korea Institute of Ocean Science and Technology) Heo, Soo-Jin (Korea Institute of Ocean Science and Technology) Kang, Do-Hyung (Korea Institute of Ocean Science and Technology) Oh, Chulhong (Korea Institute of Ocean Science and Technology) |
1 | Dong J, Hashikawa S, Konishi T, Tamaru Y, Araki T. 2006. Cloning of the novel gene encoding beta-agarase C from a marine bacterium, Vibrio sp. strain PO-303, and characterization of the gene product. Appl. Environ. Microbiol. 72: 6399-6401. DOI |
2 | Ma C, Lu X, Shi C, Li J, Gu Y, Ma Y, et al. 2007. Molecular cloning and characterization of a novel beta-agarase, AgaB, from marine Pseudoalteromonas sp. CY24. J. Biol. Chem. 282: 3747-3754. |
3 | Jang MK, Lee DG, Kim NY, Yu KH, Jang HJ, Lee SW, et al. 2009. Purification and characterization of neoagarotetraose from hydrolyzed agar. J. Microbiol. Biotechnol. 19: 1197-1200. |
4 | Zhang N, Mao X, Li RW, Hou E, Wang Y, Xue C, et al. 2017. Neoagarotetraose protects mice against intense exercise-induced fatigue damage by modulating gut microbial composition and function. Mol. Nutr. Food Res. 61: DOI: 10.1002/mnfr.201600585. DOI |
5 |
Wang W, Liu P, Hao C, Wu L, Wan W, Mao X. 2017. Neoagaro-oligosaccharide monomers inhibit inflammation in LPS-stimulated macrophages through suppression of MAPK and NF- |
6 | Mai Z, Su H, Zhang S. 2016. Isolation and characterization of a glycosyl hydrolase family 16 beta-agarase from a mangrove soil metagenomic library. Int. J. Mol. Sci. 17: E1360. DOI |
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9 | Yun EJ, Lee S, Kim JH, Kim BB, Kim HT, Lee SH, et al. 2013. Enzymatic production of 3,6-anhydro-L-galactose from agarose and its purification and in vitro skin whitening and anti-inflammatory activities. Appl. Microbiol. Biotechnol. 97: 2961-2970. DOI |
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11 | Hu B, Gong Q, Wang Y, Ma Y, Li J, Yu W. 2006. Prebiotic effects of neoagaro-oligosaccharides prepared by enzymatic hydrolysis of agarose. Anaerobe 12: 260-266. DOI |
12 |
Jang M-K, Lee OKH, Yoo KH, Lee D-G, Lee S-H. 2007. Secretory overexpression of |
13 | Fu XT, Pan CH, Lin H, Kim SM. 2009. Gene cloning, expression, and characterization of a beta-agarase, agaB34, from Agarivorans albus YKW-34. J. Microbiol. Biotechnol. 19: 257-264. |
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16 | Ha JC, Kim GT, Kim SK, Oh TK, Yu JH, Kong IS. 1997. beta-agarase from Pseudomonas sp. W7: purification of the recombinant enzyme from Escherichia coli and the effects of salt on its activity. Biotechnol. Appl. Biochem. 26: 1-6. |
17 | Lee S, Park J, Yoon S, Kim J, Kong I. 2000. Sequence analysis of a beta-agarase gene (pjaA) from Pseudomonas sp. isolated from marine environment. J. Biosci. Bioeng. 89: 485-488. DOI |
18 | Sugano Y, Matsumoto T, Kodama H, Noma M. 1993. Cloning and sequencing of agaA, a unique agarase 0107 gene from a marine bacterium, Vibrio sp. strain JT0107. Appl. Environ. Microbiol. 59: 3750-3756. |
19 | Oh C, Nikapitiya C, Lee Y, Whang I, Kim SJ, Kang DH, et al. 2010. Cloning, purification and biochemical characterization of beta agarase from the marine bacterium Pseudoalteromonas sp. AG4. J. Ind. Microbiol. Biotechnol. 37: 483-494. DOI |
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22 | Li J, Sha Y, Seswita-Zilda D, Hu Q, He P. 2014. Purification and characterization of thermostable agarase from Bacillus sp. BI-3, a thermophilic bacterium isolated from hot spring. J. Microbiol. Biotechnol. 24: 19-25. DOI |
23 | Ohta Y, Hatada Y, Nogi Y, Li Z, Ito S, Horikoshi K. 2004. Cloning, expression, and characterization of a glycoside hydrolase family 86 beta-agarase from a deep-sea Microbulbifer- like isolate. Appl. Microbiol. Biotechnol. 66: 266-275. DOI |
24 | Chi WJ, Chang YK, Hong SK. 2012. Agar degradation by microorganisms and agar-degrading enzymes. Appl. Microbiol. Biotechnol. 94: 917-930. DOI |
25 | Fu XT, Kim SM. 2010. Agarase: review of major sources, categories, purification method, enzyme characteristics and applications. Mar. Drugs 8: 200-218. DOI |
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27 | Kim DK, Jang YR, Kim KH, Lee MN, Kim AR, Jo EJ, et al. 2011. Isolation and culture properties of a thermophilic agarase-producing strain, Microbulbifer sp. SD-1. Fish. Aquat. Sci. 14: 186-191. |
28 | Lee Y, Oh C, De Zoysa M, Kim H, Wickramaarachchi WD, Whang I, et al. 2013. Molecular cloning, overexpression, and enzymatic characterization of glycosyl hydrolase family 16 beta-agarase from marine bacterium Saccharophagus sp. AG21 in Escherichia coli. J. Microbiol. Biotechnol. 23: 913-922. DOI |
29 | Du ZJ, Zhang DC, Liu SN, Chen JX, Tian XL, Zhang ZN, et al. 2009. Gilvimarinus chinensis gen. nov., sp. nov., an agar-digesting marine bacterium within the class Gammaproteobacteria isolated from coastal seawater in Qingdao, China. Int. J. System. Evol. Microbiol. 59: 2987-2990. DOI |
30 | Cheng H, Zhang S, Huo YY, Jiang XW, Zhang XQ, Pan J, et al. 2015. Gilvimarinus polysaccharolyticus sp. nov., an agar- digesting bacterium isolated from seaweed, and emended description of the genus Gilvimarinus. Int. J. System. Evol. Microbiol. 65: 562-569. DOI |
31 | Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, et al. 2011. CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 39: D225-D229. DOI |
32 | Kim BC, Kim MN, Lee KH, Kim HS, Min SR, Shin KS. 2011. Gilvimarinus agarilyticus sp. nov., a new agar-degrading bacterium isolated from the seashore of Jeju Island. Antonie Van Leeuwenhoek 100: 67-73. DOI |
33 | Lee Y, Lee SJ, Park GH, Heo SJ, Umasuthan N, Kang DH, et al. 2015. Draft genome of agar-degrading marine bacterium Gilvimarinus agarilyticus JEA5. Mar. Genomics 21: 13-14. DOI |
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41 | Dong J, Tamaru Y, Araki T. 2007. Molecular cloning, expression, and characterization of a beta-agarase gene, agaD, from a marine bacterium, Vibrio sp. strain PO-303. Biosci. Biotechnol. Biochem. 71: 38-46. DOI |
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44 | Cui F, Dong S, Shi X, Zhao X, Zhang XH. 2014. Overexpression and characterization of a novel thermostable beta-agarase YM01-3, from marine bacterium Catenovulum agarivorans YM01(T). Mar. Drugs 12: 2731-2747. DOI |
45 | Chi WJ, Lee CR, Dugerjonjuu S, Park JS, Kang DK, Hong SK. 2015. Biochemical characterization of a novel iron-dependent GH16 beta-agarase, AgaH92, from an agarolytic bacterium Pseudoalteromonas sp. H9. FEMS Microbiol. Lett. 362: fnv035. |
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