Development of a One-Step Duplex RT-PCR Method for the Simultaneous Detection of VP3/VP1 and VP1/P2B Regions of the Hepatitis A Virus |
Kim, Mi-Ju
(Graduate School of Biotechnology and Institute of Life Sciences & Resources, Kyung Hee University)
Lee, Shin-Young (Graduate School of Biotechnology and Institute of Life Sciences & Resources, Kyung Hee University) Kim, Hyun-Joong (Graduate School of Biotechnology and Institute of Life Sciences & Resources, Kyung Hee University) Lee, Jeong Su (Division of Food Microbiology, National Institute of Food and Drug Safety Evaluation) Joo, In Sun (Division of Food Microbiology, National Institute of Food and Drug Safety Evaluation) Kwak, Hyo Sun (Division of Food Microbiology, National Institute of Food and Drug Safety Evaluation) Kim, Hae-Yeong (Graduate School of Biotechnology and Institute of Life Sciences & Resources, Kyung Hee University) |
1 | Bower WA, Nainan OV, Han X, Margolis HS. 2000. Duration of viremia in hepatitis A virus infection. J. Infect. Dis. 182: 12-17. DOI |
2 | Bianchi S, Vecchio AD, Vilariño ML, Romalde JL. 2011. Evaluation of different RNA-extraction kits for sensitive detection of hepatitis A virus in strawberry samples. Food Microbiol. 28: 38-42. DOI |
3 | Butot S, Putallaz T, Sánchez G. 2007. Procedure for rapid concentration and detection of enteric viruses from berries and vegetables. Appl. Environ. Microbiol. 73: 186-192. DOI |
4 | Cuthbert JA. 2001. Hepatitis A: old and new. Clin. Microbiol. Rev. 14: 38-58. DOI |
5 | Di Pasquale S, Paniconi M, De Medici D, Suffredini E, Croci L. 2010. Duplex real-time PCR for the detection of hepatitis A virus in shellfish using feline calicivirus as a process control. J. Virol. Methods 163: 96-100. DOI |
6 | De Paula VS, Gaspar AMC, Villar LM. 2010. Optimization of methods for detecting hepatitis A virus in food. Food Environ. Virol. 2: 47-52. DOI |
7 | Fuentes C, Guix S, Pérez-Rodriguez FJ, Fuster N, Carol M, Pintó RM, Bosch A. 2014. Standardized multiplex one-step qRT-PCR for hepatitis A virus, norovirus GI and GII quantification in bivalve mollusks and water. Food Microbiol. 40: 55-63. DOI |
8 | Lees DN. 2000. Viruses and bivalve shellfish. Int. J. Food Microbiol. 59: 81-116. DOI |
9 | Hida K, Kulka M, Papafragkou E. 2013. Development of a rapid total nucleic acid extraction method for the isolation of hepatitis A virus from fresh produce. Int. J. Food Microbiol. 161: 143-150. DOI |
10 | Koopmans M, Duizer E. 2004. Foodborne viruses: an emerging problem. Int. J. Food Microbiol. 90: 23-41. DOI |
11 | Lees D, CEN WG6 TAG4. 2010. International standardisation of a method for detection of human pathogenic viruses in molluscan shellfish. Food Environ. Virol. 2: 146-155. DOI |
12 | Manso CF, Romalde JL. 2013. Detection and characterization of hepatitis A virus and norovirus in mussels from Galicia (NW Spain). Food Environ. Virol. 5: 110-118. DOI |
13 | Morales-Rayas R, Wolffs PFG, Griffiths MW. 2010. Simultaneous separation and detection of hepatitis A virus and norovirus in produce. Int. J. Food Microbiol. 139: 48-55. DOI |
14 | Nainan OV, Xia G, Vaughan G, Margolis HS. 2006. Diagnosis of hepatitis A virus infection: a molecular approach. Clin. Microbiol. Rev. 19: 63-79. DOI |
15 | Papafragkou E, Plante M, Mattison K, Bidawid S, Karthikeyan K, Farber JM, Jaykus LA. 2008. Rapid and sensitive detection of hepatitis A virus in representative food matrices. J. Virol. Methods 147: 177-187. DOI |
16 | Robertson BH, Khanna B, Nainan OV, Margolis HS. 1991. Epidemiologic patterns of wild-type hepatitis A virus determined by genetic variation. J. Infect. Dis. 163: 286-292. DOI |
17 | Sánchez G, Elizaquível P, Aznar R. 2012. A single method for recovery and concentration of enteric viruses and bacteria from fresh-cut vegetables. Int. J. Food Microbiol. 152: 9-13. DOI |
18 | Stals A, Baert L, Van Coillie E, Uyttendaele M. 2012. Extraction of food-borne viruses from food samples: a review. Int. J. Food Microbiol. 153: 1-9. DOI |
19 | Summa M, von Bonsdorff CH, Maunula N. 2012. Evaluation of four virus recovery methods for detecting noroviruses on fresh lettuce, sliced ham, and frozen raspberries. J. Virol. Methods 183: 154-160. DOI |
20 | Terio V, Di Pinto A, Di Pinto P, Martella V, Tantillo G. 2010. RNA extraction method for the PCR detection of hepatitis A virus in shellfish. Int. J. Food Microbiol. 142: 198-201. DOI |
21 | Woods JW, Escalona NG, Burkhardt III W. 2011. Direct sequencing of hepatitis A virus and norovirus RT-PCR products from environmentally contaminated oyster using M13-tailed primers. J. Virol. Methods 178: 253-257. DOI |
22 | Vaughan G, Xia G, Forbi JC, Purdy MA, Rossi LMG, Spradling PR, Khudyakov YE. 2013. Genetic relatedness among hepatitis A virus strains associated with food-borne outbreaks. PLoS One 8: e74546. DOI |