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http://dx.doi.org/10.4014/jmb.1406.06031

Complete Genome Sequence of Salmonella enterica Serovar Pullorum Multidrug Resistance Strain S06004 from China  

Li, Qiuchun (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Hu, Yachen (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Wu, Yinfei (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Wang, Xiaochun (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Xie, Xiaolei (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Tao, Mingxin (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Yin, Junlei (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Lin, Zhijie (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Jiao, Yang (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Xu, Lijuan (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Jiao, Xinan (Jiangsu Key Laboratory of Zoonosis/Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University)
Publication Information
Journal of Microbiology and Biotechnology / v.25, no.5, 2015 , pp. 606-611 More about this Journal
Abstract
As Salmonella enterica serovar Pullorum remains a major economic problem for the poultry industries of countries with no efficient control measures, we presented a multidrug resistance strain S06004 (isolated from a clinically sick chicken in China in 2006) for genome sequencing. The genome comparison showed that the strain contained two prophages, the ST104 and prophage-4 (Fels2) of E. coli LF82, which were not detected in the only published genomes of S. Pullorum RKS5078 and CDC1983-67. In addition, the GyrA Ser83 point mutation, drugresistant genes, and many antibiotic pump systems that are present in S06004 may be contributing to the multidrug resistance of this strain.
Keywords
Salmonella enterica serovar Pullorum; S06004; genome; multidrug resistance;
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1 Yin Y, He X, Szewczyk P, Nguyen T, Chang G. 2006. Structure of the multidrug transporter EmrD from Escherichia coli. Science 312: 741-744.   DOI   ScienceOn
2 Long F, Rouquette-Loughlin C, Shafer WM, Yu EW. 2008. Functional cloning and characterization of the multidrug efflux pumps NorM from Neisseria gonorrhoeae and YdhE from Escherichia coli. Antimicrob. Agents Chemother. 52: 3052-3260.   DOI   ScienceOn
3 Nishino K, Yamaguchi A. 2001. Analysis of a complete library of putative drug transporter genes in Escherichia coli. J. Bacteriol. 183: 5803-5812.   DOI   ScienceOn
4 Tanaka K, Nishimori K, Makino S, Nishimori T, Kanno T, Ishihara R, et al. 2004. Molecular characterization of a prophage of Salmonella enterica serotype Typhimurium DT104. J. Clin. Microbiol. 42: 1807-1812.   DOI
5 Pan Z, Wang X, Zhang X, Geng S, Chen X, Pan W, et al. 2009. Changes in antimicrobial resistance among Salmonella enterica subspecies enterica serovar Pullorum isolates in China from 1962 to 2007. Vet. Microbiol. 136: 387-392.   DOI   ScienceOn
6 Smith HE, Blair JM. 2014. Redundancy in the periplasmic adaptor proteins AcrA and AcrE provides resilience and an ability to export substrates of multidrug efflux. J. Antimicrob. Chemother. 69: 982-987.   DOI   ScienceOn
7 Tanabe M, Szakonyi G, Brown KA, Henderson PJ, Nield J, Byrne B. 2009. The multidrug resistance efflux complex, EmrAB from Escherichia coli forms a dimer in vitro. Biochem. Biophys. Res. Commun. 380: 338-342.   DOI   ScienceOn
8 Wigley P, Berchieri A Jr, Page KL, Smith AL, Barrow PA. 2001. Salmonella enterica serovar Pullorum persists in splenic macrophages and in the reproductive tract during persistent, disease-free carriage in chickens. Infect. Immun. 69: 7873-7879.   DOI   ScienceOn
9 Yamasaki S, Nagasawa S, Hayashi-Nishino M, Yamaguchi A, Nishino K. 2011. AcrA dependency of the AcrD efflux pump in Salmonella enterica serovar Typhimurium. J. Antibiot. (Tokyo) 64: 433-437.   DOI
10 Geng SZ, Jiao XA, Pan ZM, Chen XJ, Zhang XM, Chen X. 2009. An improved method to knock out the asd gene of Salmonella enterica serovar Pullorum. J. Biomed. Biotechnol. 2009: 646380.   DOI
11 Horiyama T, Yamaguchi A, Nishino K. 2010. TolC dependency of multidrug efflux systems in Salmonella enterica serovar Typhimurium. J. Antimicrob. Chemother. 65: 1372-1376.   DOI   ScienceOn
12 Hermans AP, Abee T, Zwietering MH, Aarts HJ. 2005. Identification of novel Salmonella enterica serovar Typhimurium DT104-specific prophage and nonprophage chromosomal sequences among serovar Typhimurium isolates by genomic subtractive hybridization. Appl. Environ. Microbiol. 71: 4979-4985.   DOI   ScienceOn
13 Leung KY, Ruschkowski SR, Finlay BB. 1992. Isolation and characterization of the aadA aminoglycoside-resistance gene from Salmonella choleraesuis. Mol. Microbiol. 6:2453-2460.   DOI   ScienceOn
14 Hopkins KL, Davies RH, Threlfall EJ. 2005. Mechanisms of quinolone resistance in Escherichia coli and Salmonella: recent developments. Int. J. Antimicrob. Agents 25: 358-373.   DOI   ScienceOn
15 Jack DL, Storms ML, Tchieu JH, Paulsen IT, Saier MH. 2000. A broad-specificity multidrug efflux pump requiring a pair of homologous SMR-type proteins. J. Bacteriol. 182: 2311-2313.   DOI
16 Levy SB, Marshall B. 2004. Antibacterial resistance worldwide: causes, challenges and responses. Nat. Med. 10: S122-S129.   DOI   ScienceOn
17 Li Q, Hu Y, Chen J, Liu Z, Han J, Sun L, et al. 2013. Identification of Salmonella enterica serovar Pullorum antigenic determinants expressed in vivo. Infect. Immun. 81: 3119-3127.   DOI   ScienceOn
18 Baucheron S, Tyler S, Boyd D, Mulvey MR, Chaslus-Dancla E, Cloeckaert A. 2004. AcrAB-TolC directs efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium DT104. Antimicrob. Agents Chemother. 48: 3729-3735.   DOI   ScienceOn
19 Brill S, Falk OS, Schuldiner S. 2012. Transforming a drug/H+ antiporter into a polyamine importer by a single mutation. Proc. Natl. Acad. Sci. USA 109: 16894-16899.   DOI
20 Borodovsky M, Lomsadze A. 2011. Gene identification in prokaryotic genomes, phages, metagenomes, and EST sequences with GeneMarkS suite. Curr. Protoc. Microbiol. 4: Unit 4.5.1-17.
21 Chen S, Cui S, McDermott PF, Zhao S, White DG, Paulsen I, et al. 2007. Contribution of target gene mutations and efflux to decreased susceptibility of Salmonella enterica serovar Typhimurium to fluoroquinolones and other antimicrobials. Antimicrob. Agents Chemother. 51: 535-542.   DOI
22 Chu X, Wu L, Liu X, Li N, Li D. 2008. Detection of broadspectrum aminoglycoside antibiotics through fluorescencelabeling aminoglycoside acetyltransferase(6’)-Ii. Anal. Biochem. 376: 144-150.   DOI   ScienceOn
23 Eaves DJ, Ricci V, Piddock LJ. 2004. Expression of acrB, acrF, acrD, marA, and soxS in Salmonella enterica serovar Typhimurium: role in multiple antibiotic resistance. Antimicrob. Agents Chemother. 48: 1145-1150.   DOI
24 Feng Y, Xu HF, Li QH, Zhang SY, Wang CX, Zhu DL, et al. 2012. Complete genome sequence of Salmonella enterica serovar Pullorum RKS5078. J. Bacteriol. 194: 744.   DOI   ScienceOn
25 Frye JG, Jackson CR. 2013. Genetic mechanisms of antimicrobial resistance identified in Salmonella enteric, Escherichia coli, and Enteroccocus spp. isolated from U.S. food animals. Front. Microbiol. 4: 135.   DOI   ScienceOn
26 Baker J, Wright SH, Tama F. 2013. Simulations of substrate transport in the multidrug transporter. Proteins 80: 1620-1632.   DOI   ScienceOn
27 Barrow PA, Freitas Neto OC. 2011. Pullorum disease and fowl typhoid - newt houghts on old diseases: a review. Avian Pathol. 40: 1-13.   DOI   ScienceOn