Browse > Article
http://dx.doi.org/10.4014/jmb.1407.07066

Effects of Supplementary Composts on Microbial Communities and Rice Productivity in Cold Water Paddy Fields  

Xie, Kaizhi (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Xu, Peizhi (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Yang, Shaohai (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Lu, Yusheng (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Jiang, Ruiping (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Gu, Wenjie (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Li, Wenying (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Sun, Lili (Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences)
Publication Information
Journal of Microbiology and Biotechnology / v.25, no.5, 2015 , pp. 569-578 More about this Journal
Abstract
Cold water paddy field soils are relatively unproductive, but can be ameliorated by supplementing with inorganic fertilizer from animal waste-based composts. The yield of two rice cultivars was significantly raised by providing either chicken manure or cow dung-based compost. The application of these composts raised the soil pH as well as both the total nitrogen and ammonium nitrogen content, which improved the soil's fertility and raised its nitrification potential. The composts had a measurable effect on the abundance of nitrogencycling-related soil microbes, as measured by estimating the copy number of various bacterial and archaeal genes using quantitative real-time PCR. The abundance of ammonia oxidizing archaea and bacteria was markedly encouraged by the application of chicken manure-based compost. Supplementation with the composts helped promote the availability of soil nitrogen in the cold water paddy field, thereby improving the soil's productivity and increasing the yield of the rice crop.
Keywords
Compost; cold water paddy field; productivity; nitrification; denitrification;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
연도 인용수 순위
1 Zeng LS, Liao M, Chen CL, Huang CY. 2007. Effects of lead contamination on soil enzymatic activities, microbial biomass, and rice physiological indices in soil–lead–rice (Oryza sativa L.) system. Ecotoxicol. Environ. Saf. 67: 67-74.   DOI   ScienceOn
2 Zhang Q-C, Shamsi IH, Xu D-T, Wang G-H, Lin X -Y, Jilani G, et al. 2012. Chemical fertilizer and organic manure inputs in soil exhibit a vice versa pattern of microbial community structure. Appl. Soil Ecol. 57: 1-8.   DOI   ScienceOn
3 Shu YY. 2005. Effect of application of different types of organic composts on rice growth under laboratory conditions. Soil Sci. Plant Nutr. 51: 443-449.   DOI
4 Shu YY, Chung RS. 2006. Rice growth and nutrient accumulation as affected by different composts. Commun. Soil Sci. Plant Anal. 37: 1139-1156.   DOI   ScienceOn
5 Tejada M, Gómez I, Fernández-Boy E, Díaz M-J. 2014. Effects of sewage sludge and Acacia dealbata composts on soil bioch emical and chemical properties. Commun. Soil Sci. Plant Anal. 45: 570-580.   DOI
6 Wallenstein MD, Vilgalys RJ. 2005. Quantitative analyses of nitrogen cycling genes in soils. Pedobiologia 49: 665-672.   DOI   ScienceOn
7 Weng B, Xie X, Yang J, Liu J, Lu H, Yan C. 2013. Research on the nitrogen cycle in rhizosphere of Kandelia obovata under ammonium and nitrate addition. Marine Pollut. Bull. 76: 227-240.   DOI   ScienceOn
8 Wessén E, Nyberg K, Jansson JK, Hallin S. 2010. Responses of bacterial and archaeal ammonia oxidizers to soil organic and fertilizer amendments under long-term management. Appl. Soil Ecol. 45: 193-200.   DOI   ScienceOn
9 Wong J, Li G, Wong M. 1996. The growth of Brassica chinensis in heavy-metal-contaminated sewage sludge compost from Hong Kong. Bioresour. Technol. 58: 309-313.   DOI   ScienceOn
10 Zhang LM, Hu HW, Shen JP, He JZ. 2011. Ammoniaoxidizing archaea have more important role than ammoniaoxidizing bacteria in ammonia oxidation of strongly acidic soils. ISME J. 6: 1032-1045.   DOI
11 Kayikcioglu HH. 2013. Effects of composts from agroindustrial wastes on microbial activity of a typic xerofluvent soil under Mediterranean conditions, SE Turkey. Geomicrobiol. J. 30: 228-236.   DOI
12 Kemnitz D, Kolb S, Conrad R. 2007. High abundance of Crenarchaeota in a temperate acidic forest soil. FEMS Microbiol. Ecol. 60: 442-448.   DOI   ScienceOn
13 Ma W, Bedard-Haughn A, Siciliano S, Farrell R. 2008. Relationship between nitrifier and denitrifier community composition and abundance in predicting nitrous oxide emissions from ephemeral wetland soils. Soil Biol. Biochem. 40: 1114-1123.   DOI   ScienceOn
14 Kong AY, Hristova K, Scow KM, Six J. 2010. Impacts of different N management regimes on nitrifier and denitrifier communities and N cycling in soil microenvironments. Soil Biol. Biochem. 42: 1523-1533.   DOI   ScienceOn
15 Naramabuye FX, Haynes RJ. 2007. The liming effect of five organic manures when incubated with an acid soil. J. Plant Nutr. Soil Sci. 170: 615-622.   DOI   ScienceOn
16 Lalisse-Grundmann G, Brunel B, Chalamet A. 1988. Denitrification in a cultivated soil: optimal glucose and nitrate concentrations. Soil Biol. Biochem. 20: 839-844.   DOI   ScienceOn
17 Nair A, Ngouajio M. 2012. Soil microbial biomass, functional microbial diversity, and nematode community structure as affected by cover crops and compost in an organic vegetable production system. Appl. Soil Ecol. 58: 45-55.   DOI   ScienceOn
18 Renner E, Becker GE. 1970. Production of nitric oxide and nitrous oxide during denitrification by Corynebacterium nephridii. J. Bacteriol. 101: 821-826.
19 Ros M, Pascual J, Garcia C, Hernandez M, Insam H. 2006. Hydrolase activities, microbial biomass and bacterial community in a soil after long-term amendment with different composts. Soil Biol. Biochem. 38: 3443-3452.   DOI   ScienceOn
20 Dahlin S, Kirchmann H, Kätterer T, Gunnarsson S, Bergström L. 2005. Possibilities for improving nitrogen use from organic materials in agricultural cropping systems. AMBIO J. Human Environ. 34: 288-295.   DOI
21 He JZ, Shen JP, Zhang LM, Zhu YG, Zheng YM, Xu MG, Di H. 2007. Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammoniaoxidizing archaea of a Chinese upland red soil under longterm fertilization practices. Environ. Microbiol. 9: 2364-2374.   DOI   ScienceOn
22 Guo GX, Deng H, Qiao M, Mu YJ, Zhu YG. 2011. Effect of pyrene on denitrification activity and abundance and composition of denitrifying community in an agricultural soil. Environ. Pollut. 159: 1886-1895.   DOI   ScienceOn
23 Hartz T, Mitchell J, Giannini C. 2000. Nitrogen and carbon mineralization dynamics of manures and composts. HortScience 35: 209-212.
24 Innerebner G, Knapp B, Vasara T, Romantschuk M, Insam H. 2006. Traceability of ammonia-oxidizing bacteria in compost-treated soils. Soil Biol. Biochem. 38: 1092-1100.   DOI   ScienceOn
25 Hussain Q, Liu Y, Jin Z, Zhang A, Pan G, Li L, et al. 2011. Temporal dynamics of ammonia oxidizer (amoA) and denitrifier (nirK) communities in the rhizosphere of a rice ecosystem from Tai Lake region, China. Appl. Soil Ecol. 48: 210-218.   DOI   ScienceOn
26 Hwa HS, Jung BJ. 2012. Analysis and quantification of ammonia-oxidizing bacteria community with amoA gene in sewage treatment plants. J. Microbiol. Biotechnol. 22: 1193-1201.   DOI   ScienceOn
27 Kandeler E, Deiglmayr K, Tscherko D, Bru D, Philippot L. 2006. Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland. Appl. Environ. Microbiol. 72: 5957-5962.   DOI   ScienceOn
28 Ai C, Liang G, Sun J, Wang X, He P, Zhou W. 2013. Different roles of rhizosphere effect and long-term fertilization in the activity and community structure of ammonia oxidizers in a calcareous fluvo-aquic soil. Soil Biol. Biochem. 57: 30-42.   DOI   ScienceOn
29 Chalhoub M, Coquet Y, Vachier P. 2013. Water and bromide dynamics in a soil amended with different urban composts. Vadose Zone J. 12: 1-11.   DOI
30 Borken W, Muhs A, Beese F. 2002. Changes in microbial and soil properties following compost treatment of degraded temperate forest soils. Soil Biol. Biochem. 34: 403-412.   DOI   ScienceOn
31 Chen XP, Zhu YG, Xia Y, Shen JP, He JZ. 2008. Ammoniaoxidizing archaea: important players in paddy rhizosphere soil? Environ. Microbiol. 10: 1978-1987.   DOI   ScienceOn
32 Chu H, Fujii T, Morimoto S, Lin X, Yagi K, Hu J, Zhang J. 2007. Community structure of ammonia-oxidizing bacteria under long-term application of mineral fertilizer and organic manure in a sandy loam soil. Appl. Environ. Microbiol. 73: 485-491.   DOI   ScienceOn
33 Chung RS, Wang FN. 2000. Effect of different composts on growth and nitrogen composition of Chinese mustard in an acid red soil. Commun. Soil Sci. Plant Anal. 31: 1209-1224.   DOI   ScienceOn
34 Cooperband L, Bollero G, Coale F. 2002. Effect of poultry litter and composts on soil nitrogen and phosphorus availability and corn production. Nutr. Cycl. Agroecosyst. 62: 185-194.   DOI   ScienceOn
35 Dadhich S, Pandey A, Prasanna R, Nain L, Kaushik B. 2012. Optimizing crop residue-based composts for enhancing soil fertility and crop yield of rice. Ind. J. Agric. Sci. 82: 85-88.