PCR-DGGE Analysis of the Microbial Communities in Three Different Chinese "Baiyunbian" Liquor Fermentation Starters |
Xiong, Xiaomao
(Hubei Baiyunbian Liquor Industry Co. Ltd.)
Hu, Yuanliang (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) Yan, Nanfeng (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) Huang, Yingna (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) Peng, Nan (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) Liang, Yunxiang (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) Zhao, Shumiao (State Key Laboratory of Agricultural Microbiology, and College of Life Science and Technology, Huazhong Agricultural University) |
1 | Hao F, Wu Q, Xu Y. 2013. Precursor supply strategy for tetramethylpyrazine production by Bacillus subtilis on solidstate fermentation of wheat bran. Appl. Environ. Microbiol. 169: 1346-1352. |
2 | Chi Z, Chi Z , Liu G, Wang F, Ju L, Zhang T . 2009. Saccharomycopsis fibuligera and its applications in biotechnology. Biotechnol. Adv. 27: 423-431. DOI ScienceOn |
3 | De Clerck E, Gevers D, De Ridder K, De Vos P. 2004. Screening of bacterial contamination during gelatine production by means of denaturing gradient gel electrophoresis, focussed on Bacillus and related endospore-forming genera. J. Appl. Microbiol. 96: 1333-1341. DOI ScienceOn |
4 | de Garnica M, SaezNieto J, Gonzalez R, Santos J, Gonzalo C. 2014. Diversity of gram-positive catalase-negative cocci in sheep bulk tank milk by comparative 16S rDNA sequence analysis. Int. Dairy J. 34: 142-145. DOI ScienceOn |
5 | Guan Z , Zhang Z, C ao Y , C hen L, X ie G , Lu J . 2012. Analysis and comparison of bacterial communities in two types of 'wheat Qu', the starter culture of Shaoxing rice wine, using nested PCR-DGGE. J. Inst. Brew. 118: 127-132. DOI |
6 | Kim HR, Kim J, Bai D, Ahn B. 2012. Feasibility of brewing makgeolli using Pichia anomala Y197-13, a non-Saccharomyces cerevisiae. J. Microbiol. Biotech. 22: 1749-1757. DOI ScienceOn |
7 | Houbraken J, Spierenburg H, Frisvad JC. 2012. Rasamsonia, a new genus comprising thermotolerant and thermophilic Talaromyces and Geosmithia species. Antonie Van Leeuwenhoek 101: 403-421. DOI |
8 | Jeyaram K, Singh WM, Capece A, Romano P. 2008. Molecular identification of yeast species associated with 'Hamei'-a traditional starter used for rice wine production in Manipur, India. Int. J. Food Microbiol. 124: 115-125. DOI ScienceOn |
9 | Kim H, Kim J, Bai D, Ahn BH. 2013. Microbiological characteristics of wild yeast strain Pichia anomala Y197-13 for brewing makgeolli. Mycobiology 41: 139-144. DOI ScienceOn |
10 | Kim T, Lee J, Kim S, Park M, Chang HC, Kim H. 2009. Analysis of microbial communities in doenjang, a Korean fermented soybean paste, using nested PCR-denaturing gradient gel electrophoresis. Int. J. Food Microbiol. 131: 265-271. DOI ScienceOn |
11 | Kurtzman CP, Robnett CJ. 1998. Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie Van Leeuwenhoek 73: 331-371. DOI ScienceOn |
12 | Li X, Ma E, Yan L, Meng H, Du X, Zhang S, Quan Z. 2011. Bacterial and fungal diversity in the traditional Chinese liquor fermentation process. Int. J. Food Microbiol. 146: 31-37. DOI ScienceOn |
13 | Liu S , Leathers TD, C opeland A, C hertkov O, G oodwin L, Mills DA. 2011. Complete genome sequence of Lactobacillus buchneri NRRL B-30929, a novel strain from a commercial ethanol plant. J. Bacteriol. 193: 4019-4020. DOI ScienceOn |
14 | Machida M, Yamada O, Gomi K. 2008. Genomics of Aspergillus oryzae: learning from the history of koji mold and exploration of its future. DNA Res. 15: 173-183. DOI ScienceOn |
15 | Liu Z, Li Z, Zhong P, Zhang P, Zeng M, Zhu C. 2010. Improvement of the quality and abatement of the biogenic amines of grass carp muscles by fermentation using mixed cultures. J. Sci. Food Agric. 90: 586-592. |
16 | Luo H, Qi H, Zhang H. 2004. Assessment of the bacterial diversity in fenvalerate-treated soil. World J. Microbiol. Biotechnol. 20: 509-515. DOI ScienceOn |
17 | Lv X, Weng X, Zhang W, Rao P, Ni L. 2012. Microbial diversity of traditional fermentation starters for Hong Qu glutinous rice wine as determined by PCR-mediated DGGE. Food Control 28: 426-434. DOI ScienceOn |
18 | May LA, Smiley B, Schmidt MG. 2001. Comparative denaturing gradient gel electrophoresis analysis of fungal communities associated with whole plant corn silage. Can. J. Microbiol. 47: 829-841. DOI ScienceOn |
19 | Muyzer G, De Waal EC, Uitterlinden AG. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700. |
20 | Nie Z, Zheng Y, Wang M, Han Y, Wang Y, Luo J, and Niu D. 2013. Exploring microbial succession and diversity during solid-state fermentation of Tianjin duliu mature vinegar. Bioresour. Technol. 148: 325-333. DOI ScienceOn |
21 | Papagora C, Roukas T, Kotzekidou P. 2013. Optimization of extracellular lipase production by Debaryomyces hansenii isolates from dry-salted olives using response surface methodology. Food Bioprod. Process. 91: 413-420. DOI ScienceOn |
22 | Prasad GS, Girisham S, Reddy SM. 2011. Potential of thermophilic fungus Rhizomucor pusillus NRRL 28626 in biotransformation of antihelmintic drug albendazole. Appl. Biochem. Biotechnol. 165: 1120-1128. DOI ScienceOn |
23 | Thompson JR, Marcelino LA, Polz MF. 2002. Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'. Nucleic Acids Res. 30: 2083-2088. DOI ScienceOn |
24 | Pringsulaka O, Patarasinpaiboon N, Suwannasai N, Atthakor W, Rangsiruji A. 2011. Isolation and characterisation of a novel Podoviridae phage infecting Weissella cibaria N22 from Nham, a Thai fermented pork sausage. Food Microbiol. 28: 518-525. DOI ScienceOn |
25 | Shi J, Xiao Y, Li X, Ma E, Du X, Quan Z. 2009. Analyses of microbial consortia in the starter of Fen liquor. Lett. Appl. Microbiol. 48: 478-485. DOI ScienceOn |
26 | Shi S, Zhang L, Wu Z, Zhang W, Deng Y, Li J. 2011. Analysis of the fungi community in multiple- and single-grains zaopei from a Luzhou-flavor liquor distillery in western China. World J. Microbiol. Biotechnol. 27: 1869-1874. DOI |
27 | van Orsouw N, Li D, Vijg J. 1997. Denaturing gradient gel electrophoresis (DGGE) increases resolution and informativity of Alu-directed inter-repeat PCR. Mol. Cell. Probes 11: 95-101. DOI ScienceOn |
28 | Wang C, Shi D, Gong G. 2008. Microorganisms in Daqu: a starter culture of Chinese Maotai-flavor liquor. World J. Microbiol. Biotechnol. 24: 2183-2190. DOI |
29 | Wang H, Zhang X, Zhao L, Xu Y. 2008. Analysis and comparison of the bacterial community in fermented grains during the fermentation for two different styles of Chinese liquor. J. Ind. Microbiol. Biotechnol. 35: 603-609. DOI |
30 | Wang HY, Gao YB, Fan QW, Xu Y. 2011. Characterization and comparison of microbial community of different typical Chinese liquor Daqus by PCR-DGGE. Lett. Appl. Microbiol. 53: 134-140. DOI ScienceOn |
31 | Wu Q, Chen L, Xu Y. 2013. Yeast community associated with the solid state fermentation of traditional Chinese Maotai-flavor liquor. Int. J. Food Microbiol. 166: 323-330. DOI ScienceOn |
32 | Zhang X, Wang Y, Guo F, He W, Zhou Y. 2013. Filamentous mycoflora in a Chinese spirit Jiuqu. Acta Mycol. Sin. 32: 224-235. |
33 | Xiu L, Guo K, Zhang H. 2012. Determination of microbial diversity in Daqu, a fermentation starter culture of Maotai liquor, using nested PCR-denaturing gradient gel electrophoresis. World J. Microbiol. Biotechnol. 28: 2375-2381. DOI ScienceOn |
34 | Yan Z , Zheng X, H an B , Han J, N out M, C hen J. 2013. Monitoring the ecology of Bacillus during Daqu incubation, a fermentation starter, using culture-dependent and cultureindependent methods. J. Microbiol. Biotechnol. 23: 614-622. DOI ScienceOn |
35 | Zhang R, Wu Q, Xu Y. 2013. Aroma characteristics of Moutai-flavour liquor produced with Bacillus licheniformis by solid-state fermentation. Lett. Appl. Microbiol. 57: 11-18. DOI ScienceOn |
36 | Zheng X, Tabrizi MR, Nout MJR, Han B. 2011. Daqu - a traditional Chinese liquor fermentation starter. J. Inst. Brew. 117: 82-90. DOI |
37 | Zheng X, Yan Z, Han B, Zwietering MH, Samson RA, Boekhout T, Nout MJR. 2012. Complex microbiota of a Chinese "Fen" liquor fermentation starter (Fen-Daqu), revealed by culture-dependent and culture-independent methods. Food Microbiol. 31: 293-300. DOI ScienceOn |