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http://dx.doi.org/10.4014/jmb.1312.12062

Depth-Specific Distribution of the SAR116 Phages Revealed by Virome Binning  

Kang, Ilnam (Department of Biological Sciences, Inha University)
Cho, Jang-Cheon (Department of Biological Sciences, Inha University)
Publication Information
Journal of Microbiology and Biotechnology / v.24, no.5, 2014 , pp. 592-596 More about this Journal
Abstract
HMO-2011, a recently isolated lytic phage that infects the SAR116 bacterial clade, represents one of the most abundant phage types in the oceans. In this study, the HMO-2011 genome sequence was compared with virome sequences obtained from various depths of the Pacific Ocean regions using metagenome binning. HMO-2011 was confirmed to be one of the most highly assigned viruses, with a maximum of 7.6% of total reads assigned. The HMO-2011-type phages demonstrated a depth-specific distribution, showing more abundance in the euphotic zone of coastal, transition, and open ocean regions as compared with the dark ocean.
Keywords
SAR116; "Candidatus Puniceispirillum marinum" strain IMCC1322; marine virus; HMO-2011; viral metagenome; metagenome binning;
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