Degradation of Lignocelluloses in Rice Straw by BMC-9, a Composite Microbial System |
Zhao, Hongyan
(Yanbian University)
Yu, Hairu (Yanbian Academy of Agricultural Science) Yuan, Xufeng (College of Agronomy and Biotechnology/Center of Biomass Engineering, China Agricultural University) Piao, Renzhe (Yanbian University) Li, Hulin (Yanbian University) Wang, Xiaofen (College of Agronomy and Biotechnology/Center of Biomass Engineering, China Agricultural University) Cui, Zongjun (College of Agronomy and Biotechnology/Center of Biomass Engineering, China Agricultural University) |
1 | Zhao Y, Li W, Zhou Z, Wang L, Pan Y, Zhao L. 2005. Dynamics of microbial community structure and cellulolytic activity in agricultural soil amended with two biofertilizers. Eur. J. Soil Biol. 41: 21-29. DOI ScienceOn |
2 | Zhu H, Qu F, Zhu L-H. 1993. Isolation of genomic DNAs from plants, fungi and bacteria using benzyl chloride. Nucleic Acids Res. 21: 5279. DOI ScienceOn |
3 | Sung MH, Kim H, Bae JW, Rhee SK, Jeon CO, Kim K, et al. 2002. Geobacillus toebii sp. nov., a novel thermophilic bacterium isolated from hay compost. Int. J. Syst. Evol. Microbiol. 52: 2251-2255. DOI ScienceOn |
4 | Tachaapaikoon C, Lee YS, Rantanakhanokchai K, Pinitglang S, Khin LK, Rho MS, and Lee S-K. 2006. Purification and characterization of two endoxylanases from an alkaliphilic Bacillus halodurans C-1. J. Microbiol. Biotechnol. 16: 613-618. |
5 | Ueno Y, Haruta S, Ishii M, Igarashi Y. 2001. Characterization of a microorganism isolated from the effluent of hydrogen fermentation by microflora. J. Biosci. Bioeng. 92: 397-400. DOI ScienceOn |
6 | Wang A, Li Y-Y, Estrada AL. 2011. Mineralization of antibiotic sulfamethoxazole by photoelectro-Fenton treatment using activated carbon fiber cathode and under UVA irradiation. Appl. Catal. B Environ. 102: 378-386. DOI ScienceOn |
7 | Wang W, Cui Z, Wang X, Niu J, Liu J, Igarashi Y. 2005. Capability and stability of degrading rice straw of composite microbial system MC1. Environ. Sci. 26: 156. |
8 | Wang X, Haruta S, Wang P, Ishii M, Igarashi Y, Cui Z. 2006. Diversity of a stable enrichment culture which is useful for silage inoculant and its succession in alfalfa silage. FEMS Microbiol. Ecol. 57: 106-115. DOI ScienceOn |
9 | Whitman W, Bowen T, Boone D. 2006. The methanogenic bacteria, pp. 165-207. In Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds.). The Prokaryotes, 3rd Ed. Springer-Verlag, New York. |
10 | Yang H, Wu H, Wang X, Cui Z, Li Y. 2011. Selection and characteristics of a switchgrass-colonizing microbial community to produce extracellular cellulases and xylanases. Bioresour. Technol. 102: 3546-3550. DOI ScienceOn |
11 | Yuan XF, Wang H, Cheng X. 2011. Enhancing the anaerobic digestion of corn stalks using composite microbial pretreatment. J. Microbiol. Biotechnol. 21: 746-752. DOI ScienceOn |
12 | Zhao H-Y, Li J, Liu J-J, Lü Y-C, Wang X-F, Cui Z-J. 2013. Microbial community dynamics during biogas slurry and cow manure compost. J. Integr. Agric. 12: 1087-1097. DOI |
13 | Nazina T, Tourova T, Poltaraus A, Novikova E, Grigoryan A, Ivanova A, et al. 2001. Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans. Int. J. Syst. Evol. Microbiol. 51: 433-446. |
14 | Menon V, Rao M. 2012. Trends in bioconversion of lignocellulose: biofuels, platform chemicals & biorefinery concept. Progr. Energy Combust. Sci. 38: 522-550. DOI ScienceOn |
15 | Muyzer G, De Waal EC, Uitterlinden AG. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reactionamplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700. |
16 | Na W, Liu P, Zhang Y-F, Jiang F-M, Ge M-H. 2010. Analysis and evaluation of utilizable resources of main crop straw in Jilin Province. J. Jilin Agric. Univ. 32: 413-418. |
17 | Peng G, Zhu W, Wang H, Lue Y, Wang X, Zheng D, Cui Z. 2010. Functional characteristics and diversity of a novel lignocelluloses degrading composite microbial system with high xylanase activity. J. Microbiol. Biotechnol. 20: 254-264. |
18 | Salvador Pedro M, Haruta S, Hazaka M, Shimada R, Yoshida C, Hiura K, et al. 2001. Denaturing gradient gel electrophoresis analyses of microbial community from fieldscale composter. J. Biosci. Bioeng. 91: 159-165. DOI ScienceOn |
19 | Singh J, Batra N, Sobti R. 2001. A highly thermostable, alkaline CMCase produced by a newly isolated Bacillus sp. VG1. World J. Microbiol. Biotechnol. 17: 761-765. DOI ScienceOn |
20 | Haruta S, Cui Z, Huang Z, Li M, Ishii M, Igarashi Y. 2002. Construction of a stable microbial community with high cellulose-degradation ability. Appl. Microbiol. Biotechnol. 59: 529-534. DOI ScienceOn |
21 | Jeanmougin F, Thompson JD, Gouy M, Higgins DG, Gibson TJ. 1998. Multiple sequence alignment with Clustal X. Trends Biochem. Sci. 23: 403-405. DOI ScienceOn |
22 | Lü Y, Li N, Gong D, Wang X, Cui Z. 2012. The effect of temperature on the structure and function of a cellulosedegrading microbial community. Appl. Biochem. Biotechnol. 168: 219-233. DOI ScienceOn |
23 | Johnvesly B, Virupakshi S, Patil G, Naik G. 2002. Cellulasefree thermostable alkaline xylanase from thermophilic and alkalophilic Bacillus sp. JB-99. J. Microbiol. Biotechnol. 12: 153-156. |
24 | Kato S, Haruta S, Cui ZJ, Ishii M, Igarashi Y. 2004. Effective cellulose degradation by a mixed-culture system composed of a cellulolytic Clostridium and aerobic non-cellulolytic bacteria. FEMS Microbiol. Ecol. 51: 133-142. DOI ScienceOn |
25 | Kato S, Haruta S, Cui ZJ, Ishii M, Igarashi Y. 2005. Stable coexistence of five bacterial strains as a cellulose-degrading community. Appl. Environ. Microbiol. 71: 7099-7106. DOI ScienceOn |
26 | Li PP, Wang XJ, Cui ZJ. 2012. Survival and performance of two cellulose-degrading microbial systems inoculated into wheat straw-amended soil. J. Microbiol. Biotechnol. 22: 126-132. DOI ScienceOn |
27 | Liu C-L, Wang X-F, Wang X-J, Li P-P, Cui Z-J. 2010. The character of normal temperature straw-rotting microbial community. Agric. Sci. China 9: 713-720. DOI ScienceOn |
28 | Liu J-B, Wang W-D, Yang H-Y, Wang X-F, Gao L-J, Cui Z-J. 2006. Process of rice straw degradation and dynamic trend of pH by the microbial community MC1. J. Environ. Sci. 18: 1142-1146. DOI ScienceOn |
29 | Castillo M, Martin-Orue SM, Manzanilla EG, Badiola I, Martin M, Gasa J. 2006. Quantification of total bacteria, enterobacteria and lactobacilli populations in pig digesta by real-time PCR. Vet. Microbiol. 114: 165-170. DOI ScienceOn |
30 | Centeno MS, Goyal A, Prates JA, Ferreira L, Gilbert HJ, Fontes CM. 2006. Novel modular enzymes encoded by a cellulase gene cluster in Cellvibrio mixtus. FEMS Microbiol. Lett. 265: 26-34. DOI ScienceOn |
31 | Bailey MJ, Biely P, Poutanen K. 1992. Interlaboratory testing of methods for assay of xylanase activity. J. Biotechnol. 23: 257-270. DOI ScienceOn |
32 | Fang GR, Li JJ, Cheng X, Cui ZJ. 2012. Performance and spatial succession of a full-scale anaerobic plant treating high-concentration cassava bioethanol wastewater. J. Microbiol. Biotechnol. 22: 1148-1154. DOI ScienceOn |
33 | Fortina MG, Mora D, Schumann P, Parini C, Manachini PL, Stackebrandt E. 2001. Reclassification of Saccharococcus caldoxylosilyticus as Geobacillus caldoxylosilyticus (Ahmad et al. 2000) comb. nov. Int. J. Syst. Evol. Microbiol. 51: 2063-2071. DOI ScienceOn |
34 | Guo P, Wang X, Zhu W, Yang H, Cheng X, Cui Z. 2008. Degradation of corn stalk by the composite microbial system of MC1. J. Environ. Sci. 20: 109-114. DOI ScienceOn |