Isolation and Biochemical Characterization of Bacillus pumilus Lipases from the Antarctic |
Arifin, Arild Ranlym
(Division of Biotechnology, The Catholic University of Korea)
Kim, Soon-Ja (Division of Biotechnology, The Catholic University of Korea) Yim, Joung Han (Korea Polar Research Institute) Suwanto, Antonius (Faculty of Biotechnology, Atma Jaya Catholic University) Kim, Hyung Kwoun (Division of Biotechnology, The Catholic University of Korea) |
1 | Choo, D. W., T. Kurihara, T. Suzuki, K. Soda, and N. Esaki. 1998. A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: Gene cloning and enzyme purification and characterization. Appl. Environ. Microbiol. 64: 486-491. |
2 | Akbulut, N., M. T. Ozturk, T. Pijning, S. I. Ozturk, and F. Gumu el. 2013. Improved activity and thermostability of Bacillus pumilus lipase by directed evolution. J. Biotechnol. DOI: 10.1016/j.jbiotec.2012.12.016. |
3 | Alquati, C., L. De Gioia, G. Santarossa, L. Alberghina, P. Fantucci, and M. Lotti. 2002. The cold-active lipase of Pseudomonas fragi. Heterologous expression, biochemical characterization and molecular modeling. Eur. J. Biochem. 269: 3321-3328. DOI ScienceOn |
4 | Arpigny, J. L., G. Feller, and C. Gerday. 1993. Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10. Biochim. Biophys. Acta 1171: 331-333. DOI ScienceOn |
5 | Bell, P. J., A. Sunna, M. D. Gibbs, N. C. Curach, H. Nevalainen, and P. L. Bergquist. 2002. Prospecting for novel lipase genes using PCR. Microbiology 148: 2283-2291. |
6 | Bustos-Jaimes, I., R. Mora-Lugo, M. L. Calcagno, and A. Farres. 2010. Kinetic studies of Gly28:Ser mutant form of Bacillus pumilus lipase: Changes in k(cat) and thermal dependence. Biochim. Biophys. Acta 1804: 2222-2227. DOI ScienceOn |
7 | Feller, G., M. Thiry, J. L. Arpigny, and C. Gerday. 1991. Cloning and expression in Escherichia coli of three lipaseencoding genes from the psychrotrophic antarctic strain Moraxella TA144. Gene 102: 111-115. DOI ScienceOn |
8 | Gerday, C., M. Aittaleb, M. Bentahir, J. P. Chessa, P. Claverie, T. Collins, et al. 2000. Cold-adapted enzymes: From fundamentals to biotechnology. Trends Biotechnol. 18: 103-107. DOI ScienceOn |
9 | Gupta, R., N. Gupta, and P. Rathi. 2004. Bacterial lipases: An overview of production, purification and biochemical properties. Appl. Microbiol. Biotechnol. 64: 763-781. DOI ScienceOn |
10 | Kim, H. K., H. J. Choi, M. H. Kim, C. B. Sohn, and T. K. Oh. 2002. Expression and characterization of Ca(2+)-independent lipase from Bacillus pumilus B26. Biochim. Biophys. Acta 1583: 205-212. DOI ScienceOn |
11 | Jaeger, K. E., B. W. Dijkstra, and M. T. Reetz. 1999. Bacterial biocatalysts: Molecular biology, three-dimensional structures, and biotechnological applications of lipases. Annu. Rev. Microbiol. 53: 315-351. DOI ScienceOn |
12 | Joseph, B., P. W. Ramteke, and G. Thomas. 2008. Cold active microbial lipases: Some hot issues and recent developments. Biotechnol. Adv. 26: 457-470. DOI ScienceOn |
13 | Karl, D. M., D. F. Bird, K. Bjorkman, T. Houlihan, R. Shackelford, and L. Tupas. 1999. Microorganisms in the accreted ice of Lake Vostok, Antarctica. Science 286: 2144-2147. DOI ScienceOn |
14 | Kulakova, L., A. Galkin, T. Nakayama, T. Nishino, and N. Esaki. 2004. Cold-active esterase from Psychrobacter sp. Ant300: Gene cloning, characterization, and the effects of Gly-->Pro substitution near the active site on its catalytic activity and stability. Biochim. Biophys. Acta 1696: 59-65. DOI ScienceOn |
15 | Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685. DOI ScienceOn |
16 | Ma, J., Z. Zhang, B. Wang, X. Kong, Y. Wang, S. Cao, and Y. Feng. 2006. Overexpression and characterization of a lipase from Bacillus subtilis. Protein Expr. Purif. 45: 22-29. DOI ScienceOn |
17 | Meyer, T. E., M. A. Cusanovich, and M. D. Kamen. 1986. Evidence against use of bacterial amino acid sequence data for construction of all-inclusive phylogenetic trees. Proc. Natl. Acad. Sci. USA 83: 217-220. DOI ScienceOn |
18 | Rasool, S., S. Johri, S. Riyaz-ul-Hassan, Q. U. Maqbool, V. Verma, S. Koul, et al. Molecular cloning of enantioselective ester hydrolase from Bacillus pumilus DBRL-191. FEMS Microbiol. Lett. 249: 113-120. |
19 | Nthangeni, M. B., H. Patterton, A. van Tonder, W. P. Vergeer, and D. Litthauer. 2001. Over-expression and properties of a purified recombinant Bacillus licheniformis lipase: A comparative report on Bacillus lipases. Enzyme Microb. Technol. 28: 705-712. DOI ScienceOn |
20 | Priscu, J. C., E. E. Adams, W. B. Lyons, M. A. Voytek, D. W. Mogk, R. L. Brown, et al. 1999. Geomicrobiology of subglacial ice above Lake Vostok, Antarctica. Science 286: 2141-2144. DOI ScienceOn |
21 | Rashid, N., Y. Shimada, S. Ezaki, H. Atomi, and T. Imanaka. 2001. Low-temperature lipase from psychrotrophic Pseudomonas sp. strain KB700A. Appl. Environ. Microbiol. 67: 4064-4069. DOI ScienceOn |
22 | Reetz, M. T. 2002. Lipases as practical biocatalysts. Curr. Opin. Chem. Biol. 6: 145-150. DOI ScienceOn |
23 | Suzuki, T., T. Nakayama, T. Kurihara, T. Nishino, and N. Esaki. 2001. Cold-active lipolytic activity of psychrotrophic Acinetobacter sp. strain no. 6. J. Biosci. Bioeng. 92: 144-148. DOI ScienceOn |
24 | Tanaka, D., S. Yoneda, Y. Yamashiro, A. Sakatoku, T. Kayashima, K. Yamakawa, and S. Nakamura. 2012. Characterization of a new cold-adapted lipase from Pseudomonas sp. TK-3. Appl. Biochem. Biotechnol. 168: 327-338. DOI ScienceOn |
25 | Zhang, J., S. Lin, and R. Zeng. 2007. Cloning, expression, and characterization of a cold-adapted lipase gene from an antarctic deep-sea psychrotrophic bacterium, Psychrobacter sp. 7195. J. Microbiol. Biotechnol. 17: 604-610. |