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http://dx.doi.org/10.4014/jmb.1306.06003

Rapid Detection of Viable Escherichia coli O157 by Coupling Propidium Monoazide with Loop-Mediated Isothermal Amplification  

Zhao, Xihong (Key Laboratory for Green Chemical Process of Ministry of Education, School of Chemical Engineering and Pharmacy, Wuhan Institute of Technology)
Wang, Jun (Department of Food Science and Biotechnology and Institute of Bioscience and Biotechnology, Kangwon National University)
Forghani, Fereidoun (Department of Food Science and Biotechnology and Institute of Bioscience and Biotechnology, Kangwon National University)
Park, Joong-Hyun (Department of Food Science and Biotechnology and Institute of Bioscience and Biotechnology, Kangwon National University)
Park, Myoung-Su (Department of Food Science and Biotechnology and Institute of Bioscience and Biotechnology, Kangwon National University)
Seo, Kun-Ho (College of Veterinary Medicine, Konkuk University)
Oh, Deog-Hwan (Department of Food Science and Biotechnology and Institute of Bioscience and Biotechnology, Kangwon National University)
Publication Information
Journal of Microbiology and Biotechnology / v.23, no.12, 2013 , pp. 1708-1716 More about this Journal
Abstract
Conventional molecular detection methods cannot distinguish between viable and dead Escherichia coli O157 cells. In this study, the loop-mediated isothermal amplification (LAMP) method combined with propidium monoazide (PMA) treatment was developed to selectively detect viable E. coli O157 cells. Four primers, including outer primers and inner primers, were specially designed for the recognition of six distinct sequences on the serogroups (O157) of the specific rfbE gene of the E. coli O157 genome. PMA selectively penetrated through the compromised cell membranes and intercalated into DNA. Amplification of DNA from dead cells was completely inhibited by $3.0{\mu}g/ml$ PMA, whereas the DNA derived from viable cells was amplified remarkably within 1 h by PMA-LAMP. Exhibiting high sensitivity and specificity, PMA-LAMP is a suitable method for evaluating the inactivation efficacy of slightly acidic electrolyzed water in broth. PMA-LAMP can selectively detect viable E. coli O157 cells. This study offers a novel molecular detection method to distinguish between viable and dead E. coli O157 cells.
Keywords
Escherichia coli O157; rapid detection; viable cell;
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1 Wang L, Zhong Q, Li Y. 2012. Ethidium monoazide-loop mediated isothermal amplification for rapid detection of Vibrio parahaemolyticus in viable but non-culturable state. Energy Procedia 17, Part B: 1858-1863.   DOI   ScienceOn
2 Yang XQ, Badoni M, Gill CO. 2011. Use of propidium monoazide and quantitative PCR for differentiation of viable Escherichia coli from E. coli killed by mild or pasteurizing heat treatments. Food Microbiol. 28: 1478-1482.   DOI   ScienceOn
3 Zhao XH, Li YM, Wang L, You LJ, Xu ZB, Li L, et al. 2010. Development and application of a loop-mediated isothermal amplification method on rapid detection of Escherichia coli O157 strains from food samples. Mol. Biol. Rep. 37: 2183 - 2188.   DOI   ScienceOn
4 Zhao XH, Wang L, Li YM, Xu ZB, L i L, He XW, et al. 2011. Development and application of a loop-mediated isothermal amplification method on rapid detection of Pseudomonas aeruginosa strains. World J. Microbiol. Biotechnol. 27: 181-184.   DOI
5 Nocker A, Cheung CY, Camper AK. 2006. Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. J. Microbiol. Methods 67: 310-320.   DOI   ScienceOn
6 Reiss G, Kunz P, Koin D, Keeffe EB. 2006. Escherichia coli O157:H7 infection in nursing homes: review of literature and report of recent outbreak. J. Am. Geriatr. Soc. 54: 680-684.   DOI   ScienceOn
7 Rudi K, Moen B, Dromtorp SM, Holck AL. 2005. Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples. Appl. Environ. Microbiol. 71: 1018-1024.   DOI   ScienceOn
8 Scallan E, Hoekstra RM, Angulo FJ, Tauxe RV, Widdowson MA, Roy SL, et al. 2011. Foodborne illness acquired in the United States - major pathogens. Emerg. Infect. Dis. 17: 7-15.   DOI
9 Tomita N, Mori Y, Kanda H, Notomi T. 2008. Loopmediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat. Protoc. 3: 877-882.   DOI   ScienceOn
10 Shan XX, Zhang YQ, Zhang ZG, Chen MR, Su YY, Yuan YN, et al. 2012. Rapid detection of food-borne Listeria monocytogenes by real-time quantitative loop-mediated isothermal amplification. Food Sci. Biotechnol. 21: 101-106.   DOI
11 Wang DG, Wang YZ, Wang JH, Zhang XW, Xiao FG. 2011. Rapid detection of viable Listeria monocytogenes in raw milk using loop-mediated isothermal amplification with the aid of ethidium monoazide. Milchwissenschaft Milk Sci. Int. 66: 426-429.
12 Wang F, Jiang L, Ge B. 2012. Loop-mediated isothermal amplification assays for detecting Shiga toxin-producing Escherichia coli in ground beef and human stools. J. Clin. Microbiol. 50: 91-97.   DOI
13 Wang F, Jiang L, Yang QR, Prinyawiwatkul W, Ge BL. 2012. Rapid and specific detection of Escherichia coli serogroups O26, O45, O103, O111, O121, O145, and O157 in ground beef, beef trim, and produce by loop-mediated isothermal amplification. Appl. Environ. Microbiol. 78: 2727-2736.   DOI
14 Wang L, Li L, Alam MJ, Geng YH, Li ZY, Yamasaki SJ, et al. 2008. Loop-mediated isothermal amplification method for rapid detection of the toxic dinoflagellate Alexandrium, which causes algal blooms and poisoning of shellfish. FEMS Microbiol. Lett. 282: 15-21.   DOI   ScienceOn
15 Hara-Kudo Y, Konishi N, Ohtsuka K, Hiramatsu R, Tanaka H, Konuma H, et al. 2008. Detection of Verotoxigenic Escherichia coli O157 and O26 in food by plating methods and LAMP method: a collaborative study. Int. J. Food Microbiol. 122: 156-161.   DOI   ScienceOn
16 Hara-Kudo Y, Nemoto J, Ohtsuka K, Segawa Y, Takatori K, Kojima T, et al. 2007. Sensitive and rapid detection of Vero toxin-producing Escherichia coli using loop-mediated isothermal amplification. J. Med. Microbiol. 56: 398-406.   DOI   ScienceOn
17 Johnston LM, Elhanafi D, Drake M, Jaykus LA. 2005. A simple method for the direct detection of Salmonella and Escherichia coli O157:H7 from raw alfalfa sprouts and spent irrigation water using PCR. J. Food Protect. 68: 2256-2263.
18 Liang NJ, Dong J, Luo LX, Li Y. 2011. Detection of Viable Salmonella in lettuce by propidium monoazide real-time PCR. J. Food Sci. 76: M234-M237.   DOI   ScienceOn
19 Kesmen Z, Yetiman AE, Yetim H. 2011. Determination of viability of food-borne bacterial pathogens in milk by using PMA/real-time PCR technique. Curr. Opin. Biotechnol. 22: S100.
20 Kouguchi Y, Fujiwara T, Teramoto M, Kuramoto M. 2010. Homogenous, real-time duplex loop-mediated isothermal amplification using a single fluorophore-labeled primer and an intercalator dye: its application to the simultaneous detection of Shiga toxin genes 1 and 2 in Shiga toxigenic Escherichia coli isolates. Mol. Cell. Probes 24: 190-195.   DOI   ScienceOn
21 Lu YX, Yang WQ, Shi L, Li L, Alam MJ, Guo SY, et al. 2009. Specific detection of viable Salmonella cells by an ethidium monoazide-loop mediated isothermal amplification (EMALAMP) method. J. Health Sci. 55: 820-824.   DOI   ScienceOn
22 Martinon A, Cronin UP, Quealy J, Stapleton A, Wilkinson MG. 2012. Swab sample preparation and viable real-time PCR methodologies for the recovery of Escherichia coli, Staphylococcus aureus or Listeria monocytogenes from artificially contaminated food processing surfaces. Food Control 24: 86-94.   DOI   ScienceOn
23 Maruyama F, Kenzaka T, Yamaguchi N, Tani K, and Nasu M. 2003. Detection of bacteria carrying the stx2 gene by in situ loop-mediated isothermal amplification. Appl. Environ. Microbiol. 69: 5023-5028.   DOI   ScienceOn
24 Mori Y, Nagamine K, Tomita N, Notomi T. 2001. Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem. Biophys. Res. Commun. 289: 150-154.   DOI   ScienceOn
25 Bilge SS, Vary Jr JC, Dowell SF, Tarr PI. 1996. Role of the Escherichia coli O157:H7 O side chain in adherence and analysis of an rfb locus. Infect. Immun. 64: 4795-4801.
26 Chang B, Taguri T, Sugiyama K, Amemura-Maekawa J, Kura F, Watanabe H. 2010. Comparison of ethidium monoazide and propidium monoazide for the selective detection of viable Legionella cells. Jap. J. Infect. Diseases 63: 119-123.
27 Elizaquivel P, Sanchez G, Selma MV, Aznar R. 2012. Application of propidium monoazide-qPCR to evaluate the ultrasonic inactivation of Escherichia coli O157:H7 in freshcut vegetable wash water. Food Microbiol. 30: 316-320.   DOI   ScienceOn
28 Chassagne L, Pradel N, Robin F, Livrelli V, Bonnet R, Delmas J. 2009. Detection of stx1, stx2, and eae genes of enterohemorrhagic Escherichia coli using SYBR Green in a real-time polymerase chain reaction. Diagn. Microbiol. Infect. Dis. 64: 98-101.   DOI   ScienceOn
29 Chen SY, Wang F, Beaulieu JC, Stein RE, Ge BL. 2011. Rapid detection of viable salmonellae in produce by coupling propidium monoazide with loop-mediated isothermal amplification. Appl. Environ. Microbiol. 77: 4008-4016.   DOI   ScienceOn
30 Ding T, Rahman SME, Oh DH. 2011. Inhibitory effects of low concentration electrolyzed water and other sanitizers against foodborne pathogens on oyster mushroom. Food Control 22: 318-322.   DOI   ScienceOn
31 Elizaquivel P, Sanchez G, Aznar R. 2012. Quantitative detection of viable foodborne E. coli O157:H7, Listeria monocytogenes and Salmonella in fresh-cut vegetables combining propidium monoazide and real-time PCR. Food Control 25: 704-708.   DOI   ScienceOn
32 Fu SJ, Qu GG, Guo SJ, Ma L, Zhang N, Zhang SL, et al. 2011. Applications of loop-mediated isothermal DNA amplification. Appl. Biochem. Biotechnol. 163: 845-850.   DOI   ScienceOn
33 Garcia PM, Arcuri EF, Brito MAVP, Lange CC, Brito JRF, Cerqueira MMOP. 2008. Detection of E. coli O157:H7 experimentally inoculated in raw milk samples by conventional method and multiplex PCR. Arquivo Brasileiro De Medicina Veterinaria E Zootecnia 60: 1241-1249.   DOI
34 Hao J, Liu H, Liu RUI, Dalai W, Zhao R, Chen T, and Li L. 2011. Efficacy of slightly acidic electrolyzed water (SAEW) for reducing microbial contamination on fresh-cut cilantro. J. Food Safety 31: 28-34.   DOI   ScienceOn
35 Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, et al. 2000. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 28: E63.   DOI
36 Asiello PJ, Baeumner AJ. 2011. Miniaturized isothermal nucleic acid amplification, a review. Lab. Chip 11: 1420-1430.   DOI   ScienceOn