1 |
Ingram-Smith C, Martin SR, Smith KS. 2006. Acetate kinase: not just a bacterial enzyme. Trends Microbiol. 14: 249-253.
DOI
ScienceOn
|
2 |
Iuchi S, Lin EC. 1992. Purification and phosphorylation of the Arc regulatory components of Escherichia coli. J. Bacteriol. 174: 5617-5623.
|
3 |
Kiswar Y, Alam KY, Clark DP. 1989. Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy. J. Bacteriol. 171: 6213-6217.
|
4 |
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. 2007. ClustalW and ClustalX version 2. Bioinformatics 23: 2947-2948.
DOI
ScienceOn
|
5 |
Lipmann F. 1941. Metabolic generation and utilization of phosphate bond energy. Adv. Enzymol Relat. Areas Mol. Biol. 1: 99-162.
|
6 |
Laskowski RA, MacArthur MW, Moss DS, Thornton JM. 1993. PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26: 283-291.
DOI
ScienceOn
|
7 |
Lawrence SH, Ferry JG. 2006. Steady-state kinetic analysis of phosphotransacetylase from Methanosarcina thermophila. J. Bacteriol. 188: 1155-1158.
DOI
ScienceOn
|
8 |
Lipmann F. 1944. Enzymatic synthesis of acetyl phosphate. J. Biol. Chem. 155: 55-57.
|
9 |
McCammon JA. 1990. Target flexibility in molecular recognition. Biochim. Biophys. Acta 347: 221-224 .
|
10 |
Miles RD, Iyer PP, Ferry JG. 2001. Site-directed mutational analysis of active site residue in the acetate kinase from Methanosarcina thermophila. J. Biol. Chem. 276: 45059-45064.
DOI
ScienceOn
|
11 |
Nemethy G, Scheraga HA. 1990. Theoretical studies of protein conformation by means of energy computations. FASEB J. 4: 3189-3197.
|
12 |
Nizam SA, Zhu J, Shimizu K. 2008. Effects of arcA and arcB genes knockout on the metabolism in Escherichia coli under aerobic condition. Biochem. Eng. J. 44: 240-250.
|
13 |
Sali A, Blundell TM. 1993. Comparative protein modeling by satisfaction of spatial restraints. J. Mol. Biol. 234: 779-815.
DOI
ScienceOn
|
14 |
Singh-Wissmann K, Ingram-Smith C, Miles RD. 1998. Identification of essential glutamates in the acetate kinase from Methanosarcina thermophila. J. Bacteriol. 180: 1129-1134.
|
15 |
Veit A, Rittmann D, Georgi T, Youn JW, Eikmanns BJ, Wendisch VF. 2009. Pathway identification combining metabolic flux and functional genomics analyses: acetate and propionate activation by Corynebacterium glutamicum. J. Biotechnol. 140: 75-83.
DOI
ScienceOn
|
16 |
Singh-Wissmann K, Miles RD, Ingram-Smith C, Ferry JG. 2000. Identification of essential arginines in the acetate kinase from Methanosarcina thermophila. Biochemistry 39: 3671-3677.
DOI
ScienceOn
|
17 |
Stivala A, Wybrow M, Wirth A, Whisstock J, Stuckey P. 2011. Automatic generation of protein structure cartoons with Pro-origami. Bioinformatics 27: 3315-3316
DOI
ScienceOn
|
18 |
Trott O, Olson AJ. 2010. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J. Comput. Chem. 31: 455-461.
|
19 |
Vieth M, Higgs RE, Robertson DH, Shapiro M, Gragg EA, Hemmerle H. 2004. Kinomics - structural biology and chemogenomics of kinase inhibitors and targets. Biochim. Biophys. Acta 1697: 243-257.
DOI
ScienceOn
|
20 |
Yang YT, Bennett GN, San KY. 2001. The effects of feed and intracellular pyruvate levels on the redistribution of metabolic fluxes in Escherichia coli. Metabolic Eng. 3: 115-123.
DOI
ScienceOn
|
21 |
Yang YT, Bennett GN, San KY. 1999. Effect of inactivation of nuo and ackA-pta on redistribution o f metab olic f luxes in Escherichia coli. Biotechnol. Bioeng. 65: 291-297.
DOI
ScienceOn
|
22 |
Wallace AC, Laskowski RA, Thornton JM.1996. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 8: 127-134
|
23 |
Eswar N, John B, Mirkovic N, Fiser A, Ilyin VA, Pieper U, et al. 2003. Tools for comparative protein structure modeling and analysis. Nucleic Acids Res. 13: 3375-3380.
|
24 |
Wang Q, QU M-S, Kim Y, Ingram LO, Shanmugam KT. 2010. Metabolic flux control at the pyruvate node in an anaerobic Escherichia coli atrain with an active pyruvate dehydrogenase. Appl. Environ. Microbiol. 76: 2107-2114.
DOI
ScienceOn
|
25 |
Fox DK, Meadow ND, Roseman S. 2000. Phosphate transfer between acetate kinase and enzyme of the bacterial phosphotransferase system. J. Biol. Chem. 261: 13498-13503.
|
26 |
Aceti DJ, Ferry JG. 1988. Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila: evidence for regulation of synthesis. J. Biol. Chem. 263: 15444-15448.
|
27 |
Bock AK, Glasemacher J, Schmidt R, Schönheit P. 1999. Purification and characterization of two extremely thermostable enzymes, phosphate acetyltransferase and acetate kinase, from the hyperthermophilic eubacterium Thermotoga maritime. J. Bacteriol. 181: 1861-1867.
|
28 |
Buss KA, Cooper DR, Ingram-Smith C, Ferry JG, Sanders DA, Hasson MS. 2001. Urokinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases. J. Bacteriol. 183: 680-686.
DOI
ScienceOn
|
29 |
Ferry JG. 1997. Enzymology of the fermentation of acetate to methane by Methanosarcina thermophila. Biofactors 6: 25-35.
DOI
|
30 |
Gorrell A, Lawrence SH, Ferry JG. 2004. Structural and kinetic analyses of arginine residues in the active site of the acetate kinase from Methanosarcina thermophila. J. Biol. Chem. 39: 10731-10742.
|
31 |
Hurley JH. 1996. The sugar kinase/heat shock protein 70/ actin superfamily: implications of conserved structure for mechanism. Annu. Rev. Biophys. Biomolec. Struct. 25: 137-162.
DOI
ScienceOn
|
32 |
Ingram-Smith C, Gorrel A, Lawrence SH, Smith K, Ferry JG. 2005. Characterization of acetate binding pocket in the Methanosarcina thermophila acetate kinase. J. Bacteriol. 187: 2386-2394.
DOI
ScienceOn
|