Browse > Article
http://dx.doi.org/10.4014/jmb.0807.414

Screening and Identification of a Streptomyces platensis YK-2, a New Transglutaminase Producer  

Yeo, Soo-Hwan (Department of Korean Food Research for Globalization, NAAS, RDA)
Yoon, Jung-Hoon (Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Lee, Dong-Gun (School of Life Sciences and Biotechnology, College of National Sciences, Kyungpook National University)
Kim, Hyun-Soo (Department of Microbiology, Keimyung University)
Publication Information
Journal of Microbiology and Biotechnology / v.19, no.6, 2009 , pp. 588-595 More about this Journal
Abstract
A bacterial strain, YK-2, was isolated as a producer of trans glutaminase from a forest soil sample of Daegu, Korea. The isolate showed a G+C content of 72.7 mol%, contained meso-$A_2pm$ as the cell-wall amino acid, and possessed menaquinone MK-9 ($H_6$) and menaquinone MK-9 ($H_8$) at a ratio of 6:4. The chemotaxonomic analysis, as well as phylogenetic analysis based on the 16S rDNA sequence, identified the isolate as a member of Streptomyces platensis. For transglutaminase production, the optimum medium composition was determined to be 2% glucose, 1% polypeptone, 1% soy tone, and 0.1% $MnCl_2$. The transglutaminase was stable within the pH range of 5.0-9.0 and $30-45^{\circ}C$, and the optimum pH and temperature were pH 8.0 and $45^{\circ}C$, respectively, without any requirement for $Ca^{2+}$.
Keywords
Microbial transglutaminase; Streptomyces platensis YK-2; 16S rDNA sequence; phylogeny;
Citations & Related Records

Times Cited By Web Of Science : 0  (Related Records In Web of Science)
연도 인용수 순위
  • Reference
1 Becker, B., M. P. Lechevalier, and H. A. Lechevalier. 1965. Chemical composition of cell-wall preparations from strains of various form-genera of aerobic actinomycetes. Appl. Microbiol. 13: 236-243   PUBMED   ScienceOn
2 Bozzola, J. J. and L. D. Russell. 1991. Electron Microscopy:Principles and Techniques for Biologists. Jones and Bartlett, Boston, U.S.A
3 Folk, J. E. 1980. Transglutaminase. Annu. Rev. Biochem. 49:517-531   DOI   PUBMED   ScienceOn
4 Folk, J. E. and J. S. Finlayson. 1977. The $\varepsilon$-($\gamma$-glutamyl) lysine crosslink and catalytic role of transglutaminase. Adv. Prot. Chem. 31: 1-33   DOI   PUBMED
5 Goodfellow, M. and D. E. Minnikin. 1985. Fatty acid and menaquinone analysis of actinomycetes and related organisms, pp. 173-196. In: Chemical Methods in Bacterial Systematics. Academic Press, London, U.K
6 Greenberg, C. S., P. J. Birckbichler, and R. H. Rice. 1991. Transglutaminases: Multifunctional cross-linking enzymes that stabilize tissues. FASEB J. 5: 3071-3077   DOI   ScienceOn
7 Hayakawa, M. and H. Nonomura. 1987. Humic acidvitamin agar, a new medium for the selective isolation of soil actinomycetes. J. Ferment. Technol. 65: 501-509   DOI   ScienceOn
8 Kelly, K. L. and D. B. Judd. 1976. Color: Universal Language and Dictionary of Names. NBS special publication 440. U.S. Department of Commerce, National Bureau of Standards, Washington, DC, U.S.A
9 Klein, J. D., E. Guzman, and G. D. Kuehn. 1992. Purification and partial characterization of transglutaminase from Physarum polycephalum. J. Bacteriol. 174: 2599-2605   DOI   PUBMED
10 Komagata, K. and K. Suzuki. 1987. Lipids and cell-wall analysis in bacterial systematics. Methods Microbiol. 19: 161-203
11 Lorand, L. and S. M. Conrad. 1984. Transglutaminase. Mol. Cell. Biochem. 58: 9-35   DOI   ScienceOn
12 Watanuki, M. and K. Aida. 1972. Significance of quinones in the classification of bacteria. J. Gen. Appl. Microbiol. 18: 469-472   DOI
13 Motoki, M., A. Okiyama, M. Nonaka, H. Tanaka, R. Uchio, A. Matsura, H. Ando, and K. Umeda. 1989. Novel transglutaminase manufacture for preparation of protein gelling compound. Jpn. Kokai Kokkyo Koho JP 0127471
14 Zhu, Y., A. Rinzema, J. Tramper, E. de Bruin, and J. Bol. 1998. Fed-batch fermentation dealing with nitrogen limitation in microbial transglutaminase production by Streptoverticillium mobaraense. Appl. Microbiol. Biotechnol. 49: 251-257   DOI   ScienceOn
15 Zhu, Y., A. Rinzema, J. Tramper, and J. Bol. 1995. Microbial transglutaminase - a review on its production and application in food processing. Appl. Microbiol. Biotechnol. 44: 277-288   DOI
16 Locci, R. 1989. Streptomycetes and related genera, pp. 2463-2468. In S. T. Williams, M. E. Sharpe, and J. G. Holt (eds.). Bergey's Manual of Systematic Bacteriology, Vol. 4. Williams and Wilkins, Baltimore, U.S.A
17 Folk, J. E. and P. W. Cole. 1966. Mechanism of action of guinea pig liver transglutaminase. J. Biol. Chem. 241: 5518-5525   PUBMED
18 Lechevalier, M. P. and H. A. Lechevalier. 1980. The chemotaxonomy of actinomycetes, pp. 227-291. In A. Dietz and W. D. Thayer (eds.), Actinomycete Taxonomy. Special publication No. 6. Society for Industrial Microbiology, Arlington, VA, U.S.A
19 Makarova, K. S., L. Aravind, and E. V. Koonin. 1999. A superfamily of archaeal, bacterial, and eukaryotic proteins homologous to animal transglutaminases. Protein Sci. 8: 1714-1719   DOI   ScienceOn
20 Ando, H., M. Adachi, K. Umeda, A. Matsuura, M. Nonaka, R. Uchio, H. Tanaka, and M. Motoki. 1989. Purification and characterization of a novel transglutaminase derived from microorganisms. Agric. Biol. Chem. 53: 2613-2617   DOI
21 Thacher, S. M. 1989. Purification of keratinocyte transglutaminase and its expression during squamous differentiation. J. Invest. Dermatol. 92: 578-584   PUBMED   ScienceOn
22 Saitou, N. and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425   PUBMED   ScienceOn
23 Chung, S. I. 1975. Multiple molecular forms of transglutaminases in human and guinea pig, pp. 259-274. In C. L. Markert (ed.). Isozymes, vol. 1. Academic Press, New York, U.S.A
24 Kurup, V. P. and J. N. Fink. 1975. A scheme for the identification of thermophilic actinomycetes associated with hypersensitivity pneumonitis. J. Clin. Microbiol. 2: 55-61   PUBMED
25 Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680   DOI   ScienceOn
26 Felsenstein, J. 1993. PHYLIP: Phylogenetic Inference Package, version 3.5. University of Washington, Seattle, WA, U.S.A
27 Shirling, E. B. and D. Gottlieb. 1966. Methods for the characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16: 313-340   DOI
28 Tamaoka, J. and K. Komagata. 1984. Determination of DNA base composition by reverse-phase high-performance liquid chromatography. FEMS Microbiol. Lett. 25: 125-128   DOI   ScienceOn
29 Lanyi, B. 1987. Classical and rapid identification methods for medically important bacteria. Methods Microbiol. 19:1-67
30 Jukes, T. H. and C. R. Cantor. 1969. Evolution of protein molecules, pp. 21-132. In H. N. Munro (ed.). Mammalian Protein Metabolism, Vol. 3, Academic Press, New York, U.S.A
31 Tsai, G. J., S. M. Lin, and S. T. Jiang. 1996. Transglutaminase from Streptoverticillium ladakanum and application to minced fish product. J. Food Sci. 61: 1234-1238   DOI   ScienceOn
32 Ichinose, A., L. E. Hendrickson, K. Fujikawa, and E. W. Davie. 1986. Amino acid sequence of the subunit of human factor XIII. Biochemistry 25: 6900-6906   DOI   ScienceOn
33 Yoon, J. H., H. Kim, S. B. Kim, H. J. Kim, W. Y. Kim, S. T. Lee, M. Goodfellow, and Y. H. Park. 1996. Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes. Int. J. Syst. Bacteriol. 46:502-505   DOI
34 Kanaji, T., H. Ozaki, T. Takao, H. Kawajiri, H. Ide, M. Motoki, and Y. Shimonishi. 1993. Primary structure of microbial transglutaminase from Streptoverticillium sp. strain s-8112. J. Biol. Chem. 268: 11565-11572   PUBMED
35 Yoon, J. H., S. T. Lee, and Y. H. Park. 1998. Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences. Int. J. Syst. Bacteriol. 48: 187-194   DOI   ScienceOn
36 Collins, M. D. 1982. A note on the separation of natural mixtures of bacterial menaquinones using reverse-phase high-performance liquid chromatography. J. Appl. Bacteriol. 52: 457-460
37 Cowan, S. T. and K. J. Steel. 1965. Manual for the Identification of Medical Bacteria. Cambridge University Press, London, U.K
38 Saddler, G. S., P. Tavecchia, S. Lociuro, M. Zanol, L. Colombo, and E. Selva. 1991. Analysis of madurose and other actinomycete whole cell sugars by gas chromatography. J. Microbiol. Methods 14: 185-191   DOI   ScienceOn