Crystallization and Preliminary X-Ray Diffraction Analysis of 5,10-Methylenetetrahydrofolate Dehydrogenase/Cyclohydrolase from Thermoplasma acidophilum DSM 1728 |
Kim, Jae-Hee
(Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University)
Sung, Min-Woo (Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University) Lee, Eun-Hye (Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University) Nam, Ki-Hyun (Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University) Hwang, Kwang-Yeon (Division of Biotechnology, College of Life Sciences and Biotechnology, Korea University) |
1 | Collaborative Computational Project, Number 4. 1994. The CCP4 suite: Programs for protein crystallography. Acta Crystallogr. D50: 760-763 |
2 | Choi, J.-H., T.-K. Kim, Y.-M. Kim, W.-C. Kim, G.-J. Joo, K. Y. Lee, and I.-K. Rhee. 2005. Cloning and characterization of cyclohexanol dehydrogenase gene from Rhodococcus sp. TK6. J. Microbiol. Biotechnol. 15: 1189-1196 과학기술학회마을 |
3 | Green, J. M., R. F. MacKenzie, and R. G. Matthews. 1988. Substrate flux through methylenetetrahydrofolate dehydrogenase: Predicted effects of the concentration of methylenetetrahydrofolate on its partitioning into pathways leading to nucleotide biosynthesis or methionine regeneration. Biochemistry 27: 8014-8022 DOI ScienceOn |
4 | Kim, K. and H. Kim. 2006. Expression, purification, and crystallization of D-psicose 3-epimerase from Agrobacterium tumefaciens. J. Microbiol. Biotechnol. 16: 647-650 과학기술학회마을 |
5 | Lee, J. H., Y. J. So, and S. H. Choi. 2006. Regulatory characteristics of the Vibrio vulnificus putAP operon encoding proline dehydrogenase and proline permease. J. Microbiol. Biotechnol. 16: 1285-1291 과학기술학회마을 |
6 | Otwinowski, Z. and W. Minor. 1997. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276: 307-326 DOI |
7 | Pawelek, P. D. and R. E. MacKenzie. 1998. Methenyltetrahydrofolate cyclohydrolase is rate limiting for the enzymatic conversion of 10-formyltetrahydrofolate to 5,10-methylenetetrahydrofolate in bifunctional dehydrogenasecyclohydrolase enzyme. Biochemistry 37: 1109-1115 DOI ScienceOn |
8 | Pelletier, J. N. and R. E. MacKenzie. 1994. Binding to the 2', 5'-ADP subsite stimulates cyclohydrolase activity of human methylenetetrahydrofolate dehydrogenase/ cyclohydrolase. Biochemistry 33: 1900-1906 DOI ScienceOn |
9 | Schmidt, A., H. Wu, R. E. MacKenzie, V. J. Chen, J. R. Bewly, J. E. Ray, J. E. Toth, and M. Cygler. 2000. Structures of three inhibitor complexes provide insight into the reaction mechanism of the human methylenetetrahydrofolate dehydrogenase/ cyclohydrolase. Biochemistry 39: 6325-6335 DOI ScienceOn |
10 | Shen, B. W., D. H. Dyer, J. Y. Huang, L. D'Ari, J. Rabinowitz, and B. L. Stoddard. 1999. The crystal structure of a bacterial, bifunctional 5,10 methylene-tetrahydrofolate dehydrogenase/ cyclohydrolase Protein Sci. 8: 1342-1349 DOI ScienceOn |
11 | Choi, J. J., J. W. Park, H. Shim, S. Lee, M. Kwon, J.-S. Yang, H. Hwang, and S.-T. Kwon. 2006. Cloning, expression, and characterization of a hyperalkaline phosphatase from the thermophilic bacterium Thermus sp. T351. J. Microbiol. Biotechnol. 16: 272-279 과학기술학회마을 |
12 | D'Ari, L. and J. C. Rabinowitz. 1991. Purification, characterization, cloning, and amino acid sequence of the bifunctional enzyme 5,10-methylenetetrahydrofolate dehydrogenase/5,10- methenyltetrahydrofolate cyclohydrolase from Escherichia coli. J. Biol. Chem. 266: 23953-23958 |
13 | Allaire, M., Y. Li, R. E. MacKenzie, and M. Cygler. 1998. The 3-D structure of a folate-dependent dehydrogenase/cyclohydrolase bifunctional enzyme at 1.5 resolution. Structure 6: 173-182 DOI ScienceOn |
14 | MacKenzie, R. E. 1984. In Blakley, R. and S. Benkovic (eds.). Folates and Pterins: Chemistry and Biochemistry of Folates. John Wiley and Sons, New York. pp. 255-306 |
15 | Langsenlehner, U., P. Krippl, W. Renner, B. Yazdani-Biuki, G. Wolf, T. C. Wascher, B. Paulweber, W. Weitzer, and H. Samonigg. 2003. The common 677C>T gene polymorphism of methylenetetrahydrofolate reductase gene is not associated with breast cancer risk. Breast Cancer Res. Treat. 81: 169-172 DOI ScienceOn |
16 | Matthews, B. W. 1968. Solvent content of protein crystals. J. Mol. Biol. 33: 6491-6493 |
17 | Pelletier, J. N. and R. E. MacKenzie. 1995. Binding and interconversion of tetrahydrofolates at a single site in the bifunctional methylenetetrahydrofolate dehydrogenase/ cyclohydrolase. Biochemistry 34: 12673-12680 DOI ScienceOn |
18 | Hum, D. W., A. W. Bell, R. Rozen, and R. E. MacKenzie. 1988. Primary structure of a human trifunctional enzyme: Isolation of a cDNA encoding methylenetetrahydrofolate dehydrogenasemethenyltetrahydrofolate cyclohydrolase-formyltetrahydrofolate synthetase. J. Biol. Chem. 263: 15946-15950 |
19 | Lucock, M. 2000. Folic acid: Nutritional biochemistry, molecular biology, and role in disease processes. Molec. Gene. Metab. 71: 121-138 DOI ScienceOn |
20 | Monzingo, A. F., A. Breksa, S. Ernst, D. R. Appling, and J. D. Robertus. 2000. The X-ray structure of the NADdependent 5,10-methylenetetrahydrofolate dehydrogenase from Saccharomyces cerevisiae. Protein Sci. 9: 1374-1381 DOI ScienceOn |
21 | Ruepp, R. A., W. Graml, M. L. Santos-Martinez, K. K. Koretke, C. Volker, H. W. Mewes, D. Frishman, S. Stocker, A. N. Lupas, and W. Baumeister. 2000. The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum. Nature 407: 508-513 DOI ScienceOn |