1 |
Brettar, I., M. Labrenz, S. Flavier, J. Botel, H. Kuosa, R. Christen, and M. G. Hofle. 2006. Identification of a Thiomicrospira denitrificans-like epsilonproteobacterium as a catalyst for autotrophic denitrification in the central Baltic Sea. Appl. Environ. Microbiol. 72: 1364-1372
DOI
ScienceOn
|
2 |
Dunbar, J., S. Takala, S. M. Barns, J. A. Davis, and C. R. Kuske. 1999. Levels of bacterial community diversity in four arid soils compared by cultivation and 16S rRNA gene cloning. Appl. Environ. Microbiol. 65: 1662-1669
|
3 |
Koenig, A. and L. H. Liu. 1996. Autotrophic denitrification of landfill leachate using elemental sulphur. Water Sci. Technol. 34: 469-476
|
4 |
O'Hara, G. W. and R. M. Daniel. 1985. Rhizobail denitrification: A review. Soil Biol. Biochem. 17: 1-9
DOI
ScienceOn
|
5 |
Schleifer, K. H., R. Amann, W. Ludwig, C. Rothemund, N. Springer, and S. Dorn. 1992. Nucleic acid probes for the identification and in situ detection of pseudomonas, pp. 127- 134. In E. Galli, S. silver, and B. Witholt (eds.). Pseudomonas: Molecular Biology and Botechnology. American Society for Microbiology, Washinton, DC
|
6 |
Snaidr, J., R. Amann, I. Huber, W. Ludwig, and K. H. Schleifer. 1997. Phylogenetic analysis and in situ identification of bacteria in acti ated sludge. Appl. Environ. Microbiol. 63: 2884-2896
|
7 |
Sublette, K. L. and N. D. Sylvester. 1987. Oxidation of hydrogen sulfide by Thiobacillus denitrificas: Desulfurization of natural gas. Biotechno. Bioeng. 29: 249-257
DOI
ScienceOn
|
8 |
Tal, Y., J. E. Watts, S. B. Schreier, K. R. Sowers, and H. J. Schreier. 2003. Characterization of the microbial community and nitrogen transformation processes associated with moving bed bioreactors in closed recirculated mariculture systems. Aquaculture 215: 187-202
DOI
|
9 |
Till, B. A., L. J. Weathers, and P. J. J. Alvarez. 1998. Fe (0)-supported autotrophic denitrification. Environ. Sci. Technol. 32: 634-639
DOI
ScienceOn
|
10 |
Zhou, J., M. R. Fries, J. C. Chee-Sanford, and J. M. Tiedje. 1995. Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth of toluene and description of Azoarcus tolulyticus sp. nov. Int. J. Syst. Bacteriol. 45: 500-506
DOI
ScienceOn
|
11 |
Philippot, L. 2002. Denitrifying genes in bacterial and archaeal genomes. Biochim. Biophys. Acta 1577: 355-376
DOI
ScienceOn
|
12 |
Baek, S. H., K. H. Kim, C. R. Yin, C.O. Jeon, W. T. Im, K. K. Kim, and S. T. Lee. 2003. Isolation and characterization of bacteria capable of degrading phenol and reducing nitrate under lowoxygen conditions. Curr. Microbiol. 47: 462-466
|
13 |
Jukes, T. H. and C. R. Cantor. 1969. Evolution of protein molecules, pp. 21-132. In H. N. Munro (ed.), Mammalian Protein Metabolism. Academic Press, New York, NY
|
14 |
Lee, S. Y., J. B. Bollinger, D. Bezdicek, and A. Ogram. 1996. Estimation of the abundance of an unculturable soil bacterial strain by a competitive quantitative PCR method. Appl. Environ. Microbiol. 62: 3787-3793
|
15 |
Gamble, T. N., M. R. Betlach, and J. M. Tiedje. 1977. Numerically dominant denitrifying bacteria from world soils. Appl. Environ. Microbiol. 33: 926-939
|
16 |
Lampe, D. G. and T. C. Zhang. 1996. Evaluation of sulfur-based autotrophic denitrification. Proceedings of the 1996 HSRC/WERC Joint Conference on the Environment, Albuquerque, New Mexico
|
17 |
Schulze, R., S. Spring, R. Amann, I. Huber, W. Ludwig, K. H. Schleifer, and P. Kampfer. 1999. Genotypic diversity of Acidovorax strains isolated from activated sludge and description of Acidovorax defluvii sp. nov. Syst. Appl. Microbiol. 22: 205-214
DOI
ScienceOn
|
18 |
Porter, K. G. and Y. S. Feig. 1980. The use of DAPI for identifying and counting aquatic microflora. Limnol. Oceanogr. 25: 943-948
DOI
ScienceOn
|
19 |
Jung, Y.-J., C. S. Park, H. G. Lee, and J. Cha. 2006. Isolation of a novel gellan-depolymerizing Bacillus sp. strain YJ-1. J. Microbiol. Biotechnol. 16: 1868-1873
과학기술학회마을
|
20 |
Robertson, L. A. and J. G. Kuene. 1984. Aerobic denitrification: A controversy revived. Arch. Microbiol. 139: 351-354
DOI
|
21 |
Timmer-Ten Hoor, A. 1981. Cell yield and bioenergetics of Thiomicrospira denitrificans compared with Thiobacillus denitrificans. Antonie van Leeuwenhoek 47: 231-243
DOI
ScienceOn
|
22 |
Hallin, S. and M. Pell. 1998. Metabolic properties of denitrifying bacteria adapting to methanol and ethanol in activated sludge. Water Res. 32: 13-18
DOI
ScienceOn
|
23 |
Ju, D.-H., M.-K. Choi, J.-H. Ahn, M.-H. Kim, J.-C. Cho, T. Kim, T. Kim, and J.-O. Ka. 2007. Molecular and ecological analyses of microbial community structures in biofilms of a fullscale aerated up-flow biobead process. J. Microbiol. Biotechnol. 17: 253-261
과학기술학회마을
|
24 |
Kelly, D. P. and A. P. Wood. 2000. Confirmation of Thiobacillus denitrificans as a species of the genus Thiobacillus, in the betasubclass of the with strain NCIMB 9548 as the type strain. Int. J. Syst. Evo Proteobacteria Microbiol. 50: 7-550
|
25 |
Kim, E. W. and J. H. Bae. 1999. Alkalinity requirement and the possibility of simultaneous heterotrophic denitrification during sulfurutilizing autotrophic denitrification, Proceedings of 7th IAWQ Asia-Pacific Regional Conference. on Asian Waterqual '99, Vol. 1, 583-588, Taipei, Taiwan
|
26 |
Saitou, N. and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425
|
27 |
Jetten, M. S. M., M. Strous, K. T. van de Pas-Schoonen, J. Schalk, L. G. J. M. Van Dongen, A. A. Van de Graaf, S. Logemann, G. Muyzer, M. C. M. Van Loosdrecht, and J. G. Kuenen. 1999. The anaerobic oxidation of ammonium. FEMS Microbiol. Rev. 22: 421-437
DOI
ScienceOn
|
28 |
Henze, M. 1991. Capabilities of biological nitrogen removal processes from wastewater. Water Sci. Technol. 23: 669-679
DOI
|
29 |
Wirsen, C. O., S. M. Sievert, C. M. Cavanaugh, S. J. Molyneaux, A. Ahmad, L. T. Taylor, E. F. DeLong, and C. D. Taylor. 2002. Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur. Appl. Environ. Microbiol. 68: 316-325
DOI
ScienceOn
|
30 |
Davies, K. J. P., D. Lloyd, and L. Boddy. 1989. The effect of oxygen on denitrification in Paracoccus denitrificans and Pseudomonas aeruginosa. J. Gen. Microbiol. 135: 2445-2451
|
31 |
Manz, W., R. Amann, M. Vancanneyt, and K. H. Scheifer. 1996. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga- Flavobacter-Bacteroides in natural environment. Microbiology 142: 1097-1106
DOI
ScienceOn
|
32 |
Foss, S., U. Heyen, and J. Harder. 1998. Alcaligenes defragrans sp. nov., description of four strains isolated on alkenoic monoterpenes ((+)-menthene, alpha-pinene, 2-carene, and alpha-phellandrene) and nitrate. Syst. Appl. Microbiol. 21: 237-244
DOI
|
33 |
Amann, R., L. Krumholz, and D. A. Stahl. 1990. Fluorescent oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172: 762-770
DOI
|
34 |
Oh, S. E., K. S. Kim, H. C. Choi, J. Cho, and I. S. Kim. 1999. Kinetics and physiology of autotrophic denitrification by denitrifying sulfur bacteria, Proceedings of 7th IAWQ Asia-Pacific Regional conference. on Asian Waterqual '99, Vol. 1, 173-178, Taipei, Taiwan
|
35 |
Pillay, D., B. Pillay, A. O. Olaniran, W. H. L. Stafford, and D. A. Cowan. 2007. Microbial community profiling in cis- and trans-dichloroethene enrichment systems using denaturing gradient gel electrophoresis. J. Microbiol. Biotechnol. 17: 560-570
과학기술학회마을
|
36 |
Chun, J. 1995. Computer-assisted classification and identification of actinomycetes. PhD thesis. University of Newcastle upon Tyne, Newcastle upon Tyne, United Kingdom
|
37 |
Hasselblad, S. and S. Hallin. 1998. Intermittent addition of external carbon to enhance denitrification in activated sludge. Water Sci. Technol. 37: 227-233
|
38 |
Lee, H. W., S. Y. Lee, J. O. Lee, H. G. Kim, J. B. Park, E. S. Choi, D. H. Park, and Y. K. Park. 2003. The microbial community analysis of 5-stage BNR process with step feed system. Water Sci. Technol. 48: 135-141
|
39 |
Amann, R. I., B. J. Binder, R. J. Olson, S. W. Chrisholm, R. Devereux, and D. A. Stahl. 1990. Combination of 16S rRNAtargeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 56: 1919-1925
|
40 |
Carter, J. P., Y. H. Hsiaao, S. Spiro, and D. J. Richardson. 1995. Soil and sediment bacteria capable of aerobic nitrate respiration. Appl. Environ. Microbiol. 61: 2852-2858
|
41 |
Tiedje, J. M. 1988. Ecology of denitrification and dissimilative nitrate reduction to ammonia, pp. 179-243. In: Bioloy of Anaerobic Microorganisms, Wiley, New York
|
42 |
Ye, R. W., D. Haas, J. O. Ka, V. Krishnapillai, A. Zimmermann, C. Baird, and J. M. Tiedje. 1995. Anaerobic activation of the entire denitrification pathway in Pseudomonas aeruginosa requires Anr, an analog of Fnr. J. Bacteriol. 177: 3606-3609
DOI
|
43 |
Tal, Y., J. E. Watts, and H. J. Schreier. 2006. Anaerobic ammoniumoxidizing (anammox) bacteria and associated activity in fixed-film biofilters of a marine recirculating aquaculture system. Appl. Environ. Microbiol. 72: 2896-2904
DOI
ScienceOn
|
44 |
American Public Health Association. 1999. Standard Methods for Examination of Water and Wastewater, 20th Ed. American Public Health Association, Washington, DC
|
45 |
Brosius, J., J. K. Palmer, H. P. Kennedy, and H. F. Noller. 1978. Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc. Nat. Acad. Sci. USA 75: 4801-4805
|
46 |
Ginige, M. P., P. Hugenholtz, H. Daims, M. Wagner, J. Keller, and L. L. Blackall. 2004. Use of stable-isotope probing, fullcycle rRNA analysis, and fluorescence in situ hybridizationmicroautoradiography to study a methanol-fed denitrifying microbial community. Appl. Environ. Microbiol. 70: 588-596
DOI
ScienceOn
|
47 |
Zumft, W. G. 1997. Cell biology and molecular basis of denitrification. Microbiol. Mol. Biol. Rev. 61: 533-616
|
48 |
Knowles, R. 1982. Denitrification. Microbiol. Rev. 46: 43-70
|
49 |
Kruithof, J. C., C. A. van Bennekom, H. A. L. Dierx, W. A. M. Hijnen, van J. A. M. Paassen, and J. C. Schippers. 1988. Nitrate removal from groundwater by sulphur/limestone filtration. Water Supply 6: 207-217
|
50 |
Manz, W., R. Amann, W. Ludwig, M. Wagner, and K. H. Schleifer. 1992. Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: Problems and solutions. Syst. Appl. Microbiol. 15: 593-600
DOI
|
51 |
van Loosdrecht, M. C. M. and M. S. M. Jetten. 1998. Microbiological conversions in nitrogen removal. Water Sci. Technol. 38: 1-7
|
52 |
Strous, M., J. A. Fuerst, E. H. Kramer, S. Logemann, G. Muyzer, K. T. van de Pas-Schoonen, R. Webb, J. G. Kuenen, and M. S. Jetten. 1999. Missing lithotroph identified as new planctomycete. Nature 400: 446-449
DOI
ScienceOn
|
53 |
Haaijer, S. C. M., M. E. W. Van der Welle, M. C. Schmid, L. P. M. Lamers, M. S. M. Jetten, and H. J. M. Op den Camp. 2006. Evidence for the involvement of betaproteobacterial Thiobacilli in the nitrate-dependent oxidation of iron sulfide minerals. FEMS Microbiol. Ecol. 58: 439-448
DOI
ScienceOn
|
54 |
Juretschko, S., A. Loy, A. Lehner, and W. Wagner. 2002. The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach. Syst. Appl. Microbiol. 25: 84-99
DOI
ScienceOn
|
55 |
Lee, H. W., S. Y. Lee, J. W. Lee, J. B. Park, E. S. Choi, and Y. K. Park. 2002. Molecular characterization of microbial community in nitrate-removing activated sludge. FEMS Microbiol. Ecol. 41: 85-94
DOI
ScienceOn
|
56 |
Ginige, M. P., J. Keller, and L. L. Blackall. 2005. Investigation of an acetate-fed denitrifying microbial community by stable isotope probing, full-cycle rRNA analysis, and fluorescent in situ hybridization-microautoradiography. Appl. Environ. Microbiol. 71: 8683-8691
DOI
ScienceOn
|
57 |
Roller, C., M. Wagner, R. Amann, W. Ludwig, and K.-H. Schleifer. 1994. In situ probing of Gram-positive bacteria with high DNA G+C content using 23S rRNA-targeted oligonucleotides. Microbiology 140: 2849-2858
DOI
ScienceOn
|
58 |
Holt, J. G., N. R. Krieg, P. H. A Sneath, J. T. Staley, and S. T. Williams. 1994. Bergey's Manual of Determinative Bacteriology. 9th Ed. Williams & Wilkins, Baltimore, U.S.A
|