Browse > Article

Cloning, Expression, and Characterization of Bacillus sp. snu-7 Inulin Fructotransferase  

Kim, Chung-Sei (School of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University)
Hong, Chang-Ki (School of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University)
Kim, Kyoung-Yun (School of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University)
Wang, Xiu-Ling (College of Life Science, Agricultural University of Hebei)
Kang, Su-Il (International Environmental Research Center, Gwangju Institute of Science and Technology)
Kim, Su-Il (School of Agricultural Biotechnology, College of Agriculture and Life Sciences, Seoul National University)
Publication Information
Journal of Microbiology and Biotechnology / v.17, no.1, 2007 , pp. 37-43 More about this Journal
Abstract
A gene encoding inulin fructotransferase (di-D-fructofuranose 1,2': 2,3' dianhydride [DFA III]-producing IFTase, EC 4.2.2.18) from Bacillus sp. snu-7 was cloned. This gene was composed of a single, 1,353-bp open reading frame encoding a protein composed of a 40-amino acid signal peptide and a 410-amino acid mature protein. The deduced amino acid sequence was 98% identical to Arthrobacter globiformis C11-1 IFTase (DFA III-producing). The enzyme was successfully expressed in E. coli as a functionally active, His-tagged protein, and it was purified in a single step using immobilized metal affinity chromatography. The purified enzyme showed much higher specific activity (1,276 units/mg protein) than other DFA III-producing IFTases. The recombinant and native enzymes were optimally active in very similar pH and temperature conditions. With a 103-min half-life at $60^{\circ}C$, the recombinant enzyme was as stable as the native enzyme. Acidic residues and cysteines potentially involved in the catalytic mechanism are proposed based on an alignment with other IFTases and a DFA IIIase.
Keywords
Bacillus sp. snu-7; inulin fructotransferase; difructofuranose anhydride;
Citations & Related Records
Times Cited By KSCI : 3  (Citation Analysis)
Times Cited By Web Of Science : 5  (Related Records In Web of Science)
연도 인용수 순위
1 Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram of protein utilizing the principle of protein dye-binding. Anal. Biochem. 72: 248-254   DOI   ScienceOn
2 Hames, B. D. and D. Rickwood. 1983. Gel Electrophoresis of Proteins: A Practical Approach. Oxford, IRL Press
3 Haraguchi, K., S. Mori, and K. Hayashi. 2000. Cloning of inulin fructotransferase (DFA III-producing) gene from Arthrobacter globiformis C11-1. J. Biosci. Bioeng. 89: 590- 595   DOI   ScienceOn
4 Kim, H.-C., H.-J. Kim, W.-B. Choi, and S.-W. Nam. 2006. Inulooligosaccharide production from inulin by Saccharomyces cerevisiae strain displaying cell-surface endoinulinase. J. Microbiol. Biotechnol. 16: 360-367   과학기술학회마을
5 Pollock, C. J. and N. J. Chatterton. 1988. Fructan in the Biochemistry of Plants. Academic Press, New York
6 Shine, J. and L. Dalgarno. 1975. Determination of cistron specificity in bacterial ribosomes. Nature 254: 34-38   DOI   ScienceOn
7 Suzuki, T., H. Hara, T. Kasai, and F. Tomita. 1998. Effects of difructose anhydride III on calcium absorption in small and large intestines of rats. Biosci. Biotechnol. Biochem. 62: 837-841   DOI   ScienceOn
8 Pospiech, A. and B. Neumann. 1995. A versatile quick-prep of genomic DNA from Gram-positive bacteria. Trends Genet. 11: 217-218   DOI   ScienceOn
9 Yokota, A., K. Enomoto, and F. Tomita. 1991. Purification and properties of inulin fructotransferase (depolymerizing) from Arthrobacter sp. H65-7. J. Ferment. Bioeng. 72: 262- 265   DOI   ScienceOn
10 Kim, K.-Y., B.-S. Koo, D. Jo, and S.-I. Kim. 2004. Cloning, expression, and purification of exoinulinase from Bacillus sp. snu-7. J. Microbiol. Biotechnol. 14: 344-349
11 Saito. K. and F. Tomita. 2000. Difructose anhydrides: Their mass-production and physiological functions. Biosci. Biotechnol. Biochem. 64: 1321-1327   DOI   ScienceOn
12 Kawamura, M., S. Takahashi, and T. Uchiyama. 1988. Purification and some properties of inulin fructotransferase (depolymerizing) from Arthrobacter ilicis. Agric. Biol. Chem. 52: 3209-3210   DOI
13 Park, J.-B. and Y.-J. Choi. 1996. Purification and characterization of inulin fructotransferase (depolymerizing) from Arthrobacter sp. A-6. J. Microbiol. Biotechnol. 6: 402-406
14 Saito, K., Y. Sumita, Y. Nagasaka, F. Tomita, and A. Yokota. 2003. Molecular cloning of the gene encoding the di-Dfructofuranose 1,2':2,3' dianhydride hydrolysis enzyme (DFA IIIase) from Arthrobacter sp. H65-7. J. Biosci. Bioeng. 95: 538-540
15 Mineo, H., H. Hara, N. Shigematsu, Y. Okuhara, and F. Tomita. 2002. Melibiose, difructose anhydride III and difructose anhydride IV enhance net calcium absorption in rat small and large intestinal epithelium by increasing the passage of tight junctions in vitro. J. Nutr. 132: 3394-3399   DOI
16 Haraguchi, K., T. Yamanaka, and K. Ohtsubo. 2002. Purification and properties of a heat stable inulin fructotransferase (DFA III-producing) from Arthrobacter pascens T13-2. Carbohydr. Polym. 509: 117-121
17 Kim, H.-Y., C.-W. Kim, and Y.-J. Choi. 2000. Cloning and expression of inulin fructotransferase gene of Arthrobacter sp. A-6 in Escherichia coli and Bacillus subtilis. J. Microbiol. Biotechnol. 10: 275-280
18 Haraguchi, K., K. Seki, M. Kishimoto, T. Nagata, T. Kasumi, K. Kainuma, and S. Kobayashi. 1995. Cloning and nucleotide sequence of the inulin fructotransferase (DFA Iproducing) gene of Arthrobacter globiformis S14-3. Biosci. Biotechnol. Biochem. 59: 1809-1812   DOI   ScienceOn
19 Momma, M., Z. Fujimoto, N. Maita, K. Haraguchi, and H. Mizuno. 2003. Expression, crystallization and preliminary X-ray crystallographic studies of Arthrobacter globiformis inulin fructotransferase. Acta Cryst. D 59: 2286-2288   DOI   ScienceOn
20 Haraguchi, K., M. Yoshida, and K. Ohtsubo. 2005. Thermostable inulin fructotransferase (DFA III-producing) from Arthrobacter sp. L68-1. Carbohydr. Polym. 59: 411- 416   DOI   ScienceOn
21 Kang, S.-I., Y.-J. Chang, S.-J. Oh, and S.-I. Kim. 1998. Purification and properties of an endo-inulinase from an Arthrobacter sp. Biotechnol. Lett. 20: 983-986   DOI   ScienceOn
22 Ha, Y.-J. and S.-I. Kim. 1992. Purification and characterization of endoinulase from Streptomyces sp. S56. Kor. J. Appl. Microbiol. Biotechnol. 20: 551-558
23 Kang, S., C. Vieille, and J. G. Zeikus. 2005. Identification of Pyrococcus furiosus amylopullulanase catalytic residues. Appl. Microbiol. Biotechnol. 66: 408-413   DOI   ScienceOn
24 Haraguchi, K., M. Kishimoto, K. Seki, K. Hayashi, S. Kobayashi, and K. Kainuma. 1988. Purification and properties of inulin fructotransferase (depolymerizing) from Arthrobacter globiformis C11-1. Agric. Biol. Chem. 52: 291-292   DOI
25 Kang, S.-I. and S.-I. Kim. 1999. Molecular cloning and sequence analysis of an endoinulinase gene from Arthrobacter sp. Biotechnol. Lett. 21: 569-574   DOI   ScienceOn
26 Kang, S.-I. and S.-I. Kim. 1993. Purification and properties of inulin fructotransferase (depolymerizing) from Enterobacter sp. S45. J. Kor. Agric. Chem. Soc. 36: 105-110
27 Haraguchi, K., M. Yoshida, and K. Ohtsubo. 2006. Inulin fructotransferase (DFA III-producing) from Leifsonia sp. T88-4. Carbohydr. Polym. (in press)
28 Sambrook, J. and D. W. Russell. 2001. Molecular Cloning; A Laboratory Manual, 3rd Ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
29 Ueda, M., R. Sashida, Y. Morimoto, and H. Ohkishi. 1994. Purification of inulin fructotransferase (DFA I-producing) from Arthrobacter sp. MCI2493 and production of DFA I from inulin by the enzyme. Biosci. Biotechnol. Biochem. 58: 574-575   DOI   ScienceOn
30 Kim, W.-P., S.-I. Kang, and S.-I. Kim. 1997. Production of inulin fructotransferase (depolymerizing) from Bacillus sp. snu-7. Agric. Chem. Biotechnol. 40: 184-188
31 Uchiyama, T., S. Niwa, and K. Tanaka. 1973. Purification and properties of Arthrobacter ureafaciens inulinase II. Biochim. Biophys. Acta 315: 412-420   DOI   ScienceOn
32 Kang, S.-I., W.-P. Kim, Y.-J. Chang, and S.-I. Kim. 1998. Purification and properties of inulin fructotransferase (DFA III-producing) from Bacillus sp. snu-7. Biosci. Biotechnol. Biochem. 62: 628-631   DOI   ScienceOn
33 Sakurai, H., A. Yokota, and F. Tomita. 1997. Molecular cloning of an inulin fructotransferase (depolymerizing) gene from Arthrobacter sp. H65-7 and its expression in Escherichia coli. Biosci. Biotechnol. Biochem. 61: 87-92   DOI   ScienceOn
34 Seki, K., K. Haraguchi, M. Kishimoto, S. Kobayashi, and K. Kainuma. 1989. Purification and properties of a novel inulin fructotransferase (DFAI-producing) from Arthrobacter globiformis S14-3. Biosci. Biotechnol. Biochem. 59: 1809- 1812   DOI   ScienceOn
35 Uchiyama, T. 1975. Action of Arthrobacter ureafaciens inulinase II on several oligofructans and bacterial levans. Biochim. Biophys. Acta 397: 153-163   DOI   ScienceOn
36 Kim, H.-E., R. Qin, and K.-S. Chae. 2005. Increased production of exoinulinase in Saccharomyces cerevisiae by expressing the Kluyveromyces marxianus INU1 gene under the control of the INU1 promoter. J. Microbiol. Biotechnol. 15: 447-450   과학기술학회마을